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crystal structure of aminopeptidase I from Clostridium acetobutylicum


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
XACR_trane2gljX1 A: alpha arraysX: HTHH: HTHT: tetra-helical, lambda repressor-likeF: ACR_tranECOD (v295.2)
WACR_trane2gljW1 A: alpha arraysX: HTHH: HTHT: tetra-helical, lambda repressor-likeF: ACR_tranECOD (v295.2)
VACR_trane2gljV1 A: alpha arraysX: HTHH: HTHT: tetra-helical, lambda repressor-likeF: ACR_tranECOD (v295.2)
UACR_trane2gljU1 A: alpha arraysX: HTHH: HTHT: tetra-helical, lambda repressor-likeF: ACR_tranECOD (v295.2)
TACR_trane2gljT1 A: alpha arraysX: HTHH: HTHT: tetra-helical, lambda repressor-likeF: ACR_tranECOD (v295.2)
SACR_trane2gljS1 A: alpha arraysX: HTHH: HTHT: tetra-helical, lambda repressor-likeF: ACR_tranECOD (v295.2)
RACR_trane2gljR1 A: alpha arraysX: HTHH: HTHT: tetra-helical, lambda repressor-likeF: ACR_tranECOD (v295.2)
QACR_trane2gljQ1 A: alpha arraysX: HTHH: HTHT: tetra-helical, lambda repressor-likeF: ACR_tranECOD (v295.2)
PACR_trane2gljP1 A: alpha arraysX: HTHH: HTHT: tetra-helical, lambda repressor-likeF: ACR_tranECOD (v295.2)
OACR_trane2gljO1 A: alpha arraysX: HTHH: HTHT: tetra-helical, lambda repressor-likeF: ACR_tranECOD (v295.2)
NACR_trane2gljN1 A: alpha arraysX: HTHH: HTHT: tetra-helical, lambda repressor-likeF: ACR_tranECOD (v295.2)
MACR_trane2gljM1 A: alpha arraysX: HTHH: HTHT: tetra-helical, lambda repressor-likeF: ACR_tranECOD (v295.2)
LV-sete2gljL3 A: alpha arraysX: Subtilisin-likeH: Subtilisin-likeT: Subtilisin-likeF: V-setECOD (v295.2)
KACR_trane2gljK1 A: alpha arraysX: HTHH: HTHT: tetra-helical, lambda repressor-likeF: ACR_tranECOD (v295.2)
JACR_trane2gljJ1 A: alpha arraysX: HTHH: HTHT: tetra-helical, lambda repressor-likeF: ACR_tranECOD (v295.2)
IACR_trane2gljI1 A: alpha arraysX: HTHH: HTHT: tetra-helical, lambda repressor-likeF: ACR_tranECOD (v295.2)
HACR_trane2gljH1 A: alpha arraysX: HTHH: HTHT: tetra-helical, lambda repressor-likeF: ACR_tranECOD (v295.2)
GACR_trane2gljG1 A: alpha arraysX: HTHH: HTHT: tetra-helical, lambda repressor-likeF: ACR_tranECOD (v295.2)
FACR_trane2gljF1 A: alpha arraysX: HTHH: HTHT: tetra-helical, lambda repressor-likeF: ACR_tranECOD (v295.2)
EACR_trane2gljE1 A: alpha arraysX: HTHH: HTHT: tetra-helical, lambda repressor-likeF: ACR_tranECOD (v295.2)
DACR_trane2gljD1 A: alpha arraysX: HTHH: HTHT: tetra-helical, lambda repressor-likeF: ACR_tranECOD (v295.2)
CACR_trane2gljC1 A: alpha arraysX: HTHH: HTHT: tetra-helical, lambda repressor-likeF: ACR_tranECOD (v295.2)
BACR_trane2gljB1 A: alpha arraysX: HTHH: HTHT: tetra-helical, lambda repressor-likeF: ACR_tranECOD (v295.2)
APeptidase_M18e2gljA1 A: alpha arraysX: Globin-likeH: Globin-likeT: Globin-likeF: Peptidase_M18ECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
X3.40.630.10 Alpha Beta 3-Layer(aba) Sandwich Aminopeptidase Zn peptidasesCATH (4.3.0)
X2.30.250.10 Mainly Beta Roll Aminopeptidase i, Domain 2 Aminopeptidase i, Domain 2CATH (4.3.0)
W3.40.630.10 Alpha Beta 3-Layer(aba) Sandwich Aminopeptidase Zn peptidasesCATH (4.3.0)
W2.30.250.10 Mainly Beta Roll Aminopeptidase i, Domain 2 Aminopeptidase i, Domain 2CATH (4.3.0)
V3.40.630.10 Alpha Beta 3-Layer(aba) Sandwich Aminopeptidase Zn peptidasesCATH (4.3.0)
V2.30.250.10 Mainly Beta Roll Aminopeptidase i, Domain 2 Aminopeptidase i, Domain 2CATH (4.3.0)
U3.40.630.10 Alpha Beta 3-Layer(aba) Sandwich Aminopeptidase Zn peptidasesCATH (4.3.0)
U2.30.250.10 Mainly Beta Roll Aminopeptidase i, Domain 2 Aminopeptidase i, Domain 2CATH (4.3.0)
T3.40.630.10 Alpha Beta 3-Layer(aba) Sandwich Aminopeptidase Zn peptidasesCATH (4.3.0)
T2.30.250.10 Mainly Beta Roll Aminopeptidase i, Domain 2 Aminopeptidase i, Domain 2CATH (4.3.0)
S3.40.630.10 Alpha Beta 3-Layer(aba) Sandwich Aminopeptidase Zn peptidasesCATH (4.3.0)
S2.30.250.10 Mainly Beta Roll Aminopeptidase i, Domain 2 Aminopeptidase i, Domain 2CATH (4.3.0)
R3.40.630.10 Alpha Beta 3-Layer(aba) Sandwich Aminopeptidase Zn peptidasesCATH (4.3.0)
R2.30.250.10 Mainly Beta Roll Aminopeptidase i, Domain 2 Aminopeptidase i, Domain 2CATH (4.3.0)
Q3.40.630.10 Alpha Beta 3-Layer(aba) Sandwich Aminopeptidase Zn peptidasesCATH (4.3.0)
Q2.30.250.10 Mainly Beta Roll Aminopeptidase i, Domain 2 Aminopeptidase i, Domain 2CATH (4.3.0)
P3.40.630.10 Alpha Beta 3-Layer(aba) Sandwich Aminopeptidase Zn peptidasesCATH (4.3.0)
P2.30.250.10 Mainly Beta Roll Aminopeptidase i, Domain 2 Aminopeptidase i, Domain 2CATH (4.3.0)
O3.40.630.10 Alpha Beta 3-Layer(aba) Sandwich Aminopeptidase Zn peptidasesCATH (4.3.0)
O2.30.250.10 Mainly Beta Roll Aminopeptidase i, Domain 2 Aminopeptidase i, Domain 2CATH (4.3.0)
N3.40.630.10 Alpha Beta 3-Layer(aba) Sandwich Aminopeptidase Zn peptidasesCATH (4.3.0)
N2.30.250.10 Mainly Beta Roll Aminopeptidase i, Domain 2 Aminopeptidase i, Domain 2CATH (4.3.0)
M3.40.630.10 Alpha Beta 3-Layer(aba) Sandwich Aminopeptidase Zn peptidasesCATH (4.3.0)
M2.30.250.10 Mainly Beta Roll Aminopeptidase i, Domain 2 Aminopeptidase i, Domain 2CATH (4.3.0)
L3.40.630.10 Alpha Beta 3-Layer(aba) Sandwich Aminopeptidase Zn peptidasesCATH (4.3.0)
L2.30.250.10 Mainly Beta Roll Aminopeptidase i, Domain 2 Aminopeptidase i, Domain 2CATH (4.3.0)
K3.40.630.10 Alpha Beta 3-Layer(aba) Sandwich Aminopeptidase Zn peptidasesCATH (4.3.0)
K2.30.250.10 Mainly Beta Roll Aminopeptidase i, Domain 2 Aminopeptidase i, Domain 2CATH (4.3.0)
J3.40.630.10 Alpha Beta 3-Layer(aba) Sandwich Aminopeptidase Zn peptidasesCATH (4.3.0)
J2.30.250.10 Mainly Beta Roll Aminopeptidase i, Domain 2 Aminopeptidase i, Domain 2CATH (4.3.0)
I3.40.630.10 Alpha Beta 3-Layer(aba) Sandwich Aminopeptidase Zn peptidasesCATH (4.3.0)
I2.30.250.10 Mainly Beta Roll Aminopeptidase i, Domain 2 Aminopeptidase i, Domain 2CATH (4.3.0)
H3.40.630.10 Alpha Beta 3-Layer(aba) Sandwich Aminopeptidase Zn peptidasesCATH (4.3.0)
H2.30.250.10 Mainly Beta Roll Aminopeptidase i, Domain 2 Aminopeptidase i, Domain 2CATH (4.3.0)
G3.40.630.10 Alpha Beta 3-Layer(aba) Sandwich Aminopeptidase Zn peptidasesCATH (4.3.0)
G2.30.250.10 Mainly Beta Roll Aminopeptidase i, Domain 2 Aminopeptidase i, Domain 2CATH (4.3.0)
F3.40.630.10 Alpha Beta 3-Layer(aba) Sandwich Aminopeptidase Zn peptidasesCATH (4.3.0)
F2.30.250.10 Mainly Beta Roll Aminopeptidase i, Domain 2 Aminopeptidase i, Domain 2CATH (4.3.0)
E3.40.630.10 Alpha Beta 3-Layer(aba) Sandwich Aminopeptidase Zn peptidasesCATH (4.3.0)
E2.30.250.10 Mainly Beta Roll Aminopeptidase i, Domain 2 Aminopeptidase i, Domain 2CATH (4.3.0)
D3.40.630.10 Alpha Beta 3-Layer(aba) Sandwich Aminopeptidase Zn peptidasesCATH (4.3.0)
D2.30.250.10 Mainly Beta Roll Aminopeptidase i, Domain 2 Aminopeptidase i, Domain 2CATH (4.3.0)
C3.40.630.10 Alpha Beta 3-Layer(aba) Sandwich Aminopeptidase Zn peptidasesCATH (4.3.0)
C2.30.250.10 Mainly Beta Roll Aminopeptidase i, Domain 2 Aminopeptidase i, Domain 2CATH (4.3.0)
B3.40.630.10 Alpha Beta 3-Layer(aba) Sandwich Aminopeptidase Zn peptidasesCATH (4.3.0)
B2.30.250.10 Mainly Beta Roll Aminopeptidase i, Domain 2 Aminopeptidase i, Domain 2CATH (4.3.0)
A3.40.630.10 Alpha Beta 3-Layer(aba) Sandwich Aminopeptidase Zn peptidasesCATH (4.3.0)
A2.30.250.10 Mainly Beta Roll Aminopeptidase i, Domain 2 Aminopeptidase i, Domain 2CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D, E
PF02127Aminopeptidase I zinc metalloprotease (M18) (Peptidase_M18)Aminopeptidase I zinc metalloprotease (M18)- Family

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D, E
IPR022983M18 family aminopeptidase 1, putativeFamily
A, B, C, D, E
IPR023358Peptidase M18, domain 2Homologous Superfamily
A, B, C, D, E
IPR001948Peptidase M18Family