2G2U
Crystal Structure of the SHV-1 Beta-lactamase/Beta-lactamase inhibitor protein (BLIP) complex
External Resource: Annotation
- Domain Annotation: SCOP/SCOPe Classification
- Domain Annotation: SCOP2 Classification
- Domain Annotation: ECOD Classification
- Domain Annotation: CATH
- AMR Gene: CARD Annotation
- AMR Gene Family: CARD Annotation
- Protein Family Annotation
- Gene Ontology: Gene Product Annotation
- InterPro: Protein Family Classification
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d2g2ua_ | Multi-domain proteins (alpha and beta) | beta-lactamase/transpeptidase-like | beta-lactamase/transpeptidase-like | beta-Lactamase/D-ala carboxypeptidase | beta-Lactamase, class A | (Klebsiella pneumoniae ) [TaxId: 573 ], | SCOPe (2.08) |
B | d2g2ub_ | Alpha and beta proteins (a+b) | BLIP-like | beta-lactamase-inhibitor protein, BLIP | beta-lactamase-inhibitor protein, BLIP | automated matches | (Streptomyces clavuligerus ) [TaxId: 1901 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | beta-lactamase/transpeptidase-like | 8038399 | 3001604 | SCOP2B (2022-06-29) |
B | SCOP2 Family | BLIP-like | 8029236 | 4001739 | SCOP2 (2022-06-29) |
B | SCOP2 Superfamily | BLIP repeat-like | 8092081 | 3000321 | SCOP2 (2022-06-29) |
B | SCOP2 Superfamily | BLIP repeat-like | 8041615 | 3000321 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Peptidase_S11_1st_1 | e2g2uA1 | A: alpha complex topology | X: alpha-helical domain in beta-lactamase/transpeptidase-like proteins (From Topology) | H: alpha-helical domain in beta-lactamase/transpeptidase-like proteins (From Topology) | T: alpha-helical domain in beta-lactamase/transpeptidase-like proteins | F: Peptidase_S11_1st_1 | ECOD (1.6) |
A | PRK15442,Beta-lactamase2 | e2g2uA2 | A: a+b three layers | X: Profilin-like | H: a+b domain in beta-lactamase/transpeptidase-like proteins (From Topology) | T: a+b domain in beta-lactamase/transpeptidase-like proteins | F: PRK15442,Beta-lactamase2 | ECOD (1.6) |
B | BLIP | e2g2uB1 | A: a+b two layers | X: BLIP-like | H: beta-lactamase-inhibitor protein, BLIP (From Topology) | T: beta-lactamase-inhibitor protein, BLIP | F: BLIP | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.40.710.10 | Alpha Beta | 3-Layer(aba) Sandwich | Beta-lactamase | DD-peptidase/beta-lactamase superfamily | CATH (4.3.0) |
B | 3.30.1450.10 | Alpha Beta | 2-Layer Sandwich | Beta-lactamase Inhibitory Protein | Chain:B, domain 1 | CATH (4.3.0) |
AMR Gene: CARD Annotation CARD Database Homepage
Chains | Accession | Short Name | Description | Provenance Source (Version) |
---|---|---|---|---|
ARO:3001110 | SHV-53 | SHV-53 is a beta-lactamase that has been found in clinical isolates. | CARD (3.2.9) |
AMR Gene Family: CARD Annotation CARD Database Homepage
Chains | Accession | Gene Family | Drug Class | Resistance Machanism | Provenance Source (Version) |
---|---|---|---|---|---|
ARO:3000015 | SHV beta-lactamase | carbapenem, cephalosporin, penam | antibiotic inactivation | CARD (3.2.9) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF13354 | Beta-lactamase enzyme family (Beta-lactamase2) | Beta-lactamase enzyme family | This is the catalytic domain of class A beta-lactamases [1]. It is closely related to Beta-lactamase, Pfam:PF00144, the serine beta-lactamase-like superfamily, which contains the distantly related Pfam:PF00905 and PF00768 D-alanyl-D-alanine carboxype ... | Domain | |
PF00144 | Beta-lactamase (Beta-lactamase) | Beta-lactamase | This family appears to be distantly related to Pfam:PF00905 and PF00768 D-alanyl-D-alanine carboxypeptidase. | Domain | |
PF07467 | Beta-lactamase inhibitor (BLIP) (BLIP) | Beta-lactamase inhibitor (BLIP) | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR045155 | Beta-lactamase class A, catalytic domain | Domain | |
IPR012338 | Beta-lactamase/transpeptidase-like | Homologous Superfamily | |
IPR000871 | Beta-lactamase, class-A | Family | |
IPR023650 | Beta-lactamase, class-A active site | Active Site | |
IPR037873 | BamE-like | Homologous Superfamily | |
IPR024221 | Beta-lactamase-inhibitor protein BLIP domain superfamily | Homologous Superfamily | |
IPR009099 | Beta-lactamase-inhibitor protein BLIP | Family |