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 2F8D | pdb_00002f8d

BenM effector-Binding domain crystallized from high pH conditions

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BN6_Mtasee2f8dB1 A: alpha arraysX: Four-helical up-and-down bundleH: N-terminal helical domain in restriction-modification system methylation subunitT: N-terminal helical domain in restriction-modification system methylation subunitF: N6_MtaseECOD (v295.2)
AN6_Mtasee2f8dA1 A: alpha arraysX: Four-helical up-and-down bundleH: N-terminal helical domain in restriction-modification system methylation subunitT: N-terminal helical domain in restriction-modification system methylation subunitF: N6_MtaseECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B3.40.190.10 Alpha Beta 3-Layer(aba) Sandwich D-Maltodextrin-Binding Protein domain 2CATH (4.3.0)
A3.40.190.10 Alpha Beta 3-Layer(aba) Sandwich D-Maltodextrin-Binding Protein domain 2CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
HTH-type transcriptional regulator benM -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR005119LysR, substrate-bindingDomain
A, B
IPR000847LysR, HTH, N-terminal domainDomain
A, B
IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
A, B
IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily