Crystal structure of pumpkin seed globulin
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | d2evxa1 | All beta proteins | Double-stranded beta-helix | RmlC-like cupins | automated matches | automated matches | winter squash (Cucurbita maxima ) [TaxId: 3661 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | EXOSC1 | e2evxA1 | A: a/b three-layered sandwiches | X: Anticodon-binding domain of Class II aaRS | H: Anticodon-binding domain of Class II aaRS | T: Anticodon-binding domain of Class II aaRS | F: EXOSC1 | ECOD (v294.1) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| A | 2.60.120.10 | Mainly Beta | Sandwich | Jelly Rolls | Jelly Rolls | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF00190 | Cupin (Cupin_1) | Cupin | This family represents the conserved barrel domain of the 'cupin' superfamily [1] ('cupa' is the Latin term for a small barrel). This family contains 11S and 7S plant seed storage proteins, and germins. Plant seed storage proteins provide the major ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| 11S globulin beta subunit | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR006044 | 11-S seed storage protein, plant | Family | |
| IPR022379 | 11-S seed storage protein, conserved site | Conserved Site | |
| IPR006045 | Cupin 1 | Domain | |
| IPR011051 | RmlC-like cupin domain superfamily | Homologous Superfamily | |
| IPR050253 | Seed Storage and Functional Proteins | Family | |
| IPR014710 | RmlC-like jelly roll fold | Homologous Superfamily |














