2E4M
Crystal structure of hemagglutinin subcomponent complex (HA-33/HA-17) from Clostridium botulinum serotype D strain 4947
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d2e4ma1 | All beta proteins | beta-Trefoil | Ricin B-like lectins | Ricin B-like | automated matches | (Clostridium botulinum ) [TaxId: 1491 ], | SCOPe (2.08) |
B | d2e4mb1 | All beta proteins | beta-Trefoil | Ricin B-like lectins | Ricin B-like | automated matches | (Clostridium botulinum ) [TaxId: 1491 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | RicinB_lectin_2 | e2e4mA2 | A: beta duplicates or obligate multimers | X: beta-Trefoil (From Topology) | H: beta-Trefoil (From Topology) | T: beta-Trefoil | F: RicinB_lectin_2 | ECOD (1.6) |
B | RicinB_lectin_2 | e2e4mB1 | A: beta duplicates or obligate multimers | X: beta-Trefoil (From Topology) | H: beta-Trefoil (From Topology) | T: beta-Trefoil | F: RicinB_lectin_2 | ECOD (1.6) |
C | Botulinum_HA-17 | e2e4mC1 | A: beta duplicates or obligate multimers | X: beta-Trefoil (From Topology) | H: beta-Trefoil (From Topology) | T: beta-Trefoil | F: Botulinum_HA-17 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.80.10.50 | Mainly Beta | Trefoil | Trefoil (Acidic Fibroblast Growth Factor, subunit A) | CATH (4.3.0) | |
B | 2.80.10.50 | Mainly Beta | Trefoil | Trefoil (Acidic Fibroblast Growth Factor, subunit A) | CATH (4.3.0) | |
C | 2.80.10.50 | Mainly Beta | Trefoil | Trefoil (Acidic Fibroblast Growth Factor, subunit A) | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF14200 | Ricin-type beta-trefoil lectin domain-like (RicinB_lectin_2) | Ricin-type beta-trefoil lectin domain-like | - | Domain | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
Main hemagglutinin component | - | - | - | |
HA-17 | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR035992 | Ricin B-like lectins | Homologous Superfamily | |
IPR000772 | Ricin B, lectin domain | Domain | |
IPR035992 | Ricin B-like lectins | Homologous Superfamily | |
IPR008903 | Hemagglutinin component HA-17 | Family |