2CJS
Structural Basis for a Munc13-1 Homodimer - Munc13-1 - RIM Heterodimer Switch: C2-domains as Versatile Protein-Protein Interaction Modules
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d2cjsa1 | All beta proteins | C2 domain-like | C2 domain (Calcium/lipid-binding domain, CaLB) | PLC-like (P variant) | Unc-13 homolog A | RAT (Rattus norvegicus ) [TaxId: 10116 ], | SCOPe (2.08) |
A | d2cjsa2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | RAT (Rattus norvegicus ) [TaxId: 10116 ], | SCOPe (2.08) |
B | d2cjsb2 | All beta proteins | C2 domain-like | C2 domain (Calcium/lipid-binding domain, CaLB) | PLC-like (P variant) | automated matches | RAT (Rattus norvegicus ) [TaxId: 10116 ], | SCOPe (2.08) |
B | d2cjsb3 | Artifacts | Tags | Tags | Tags | N-terminal Tags | RAT (Rattus norvegicus ) [TaxId: 10116 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | PLC-like (P variant) | 8018896 | 4002218 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | C2 domain (calcium/lipid-binding domain, calb) | 8057937 | 3000965 | SCOP2 (2022-06-29) |
B | SCOP2B Superfamily | C2 domain (calcium/lipid-binding domain, calb) | 8057937 | 3000965 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | C2_1 | e2cjsA1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: C2 domain (From Topology) | T: C2 domain | F: C2_1 | ECOD (1.6) |
B | C2_1 | e2cjsB1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: C2 domain (From Topology) | T: C2 domain | F: C2_1 | ECOD (1.6) |
C | KOG3799 | e2cjsC1 | A: few secondary structure elements | X: RING/U-box-like | H: RING/U-box-like | T: FYVE/PHD zinc finger | F: KOG3799 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.60.40.150 | Mainly Beta | Sandwich | Immunoglobulin-like | C2 domain | CATH (4.3.0) |
B | 2.60.40.150 | Mainly Beta | Sandwich | Immunoglobulin-like | C2 domain | CATH (4.3.0) |
C | 3.30.60.120 | Alpha Beta | 2-Layer Sandwich | Wheat Germ Agglutinin (Isolectin 2) | domain 1 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00168 | C2 domain (C2) | C2 domain | - | Domain | |
PF22601 | RIM2-alpha zinc finger (RIM2a_ZnF) | RIM2-alpha zinc finger | This entry represents the zinc finger domain of Regulating synaptic membrane exocytosis protein 2 (RIM2a) and related proteins. This domain alone is responsible for the interaction with Munc13-1 by engaging with the Munc13-1 C2A domain [1]. Structura ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR014770 | Munc13 homology 1 | Domain | |
IPR037302 | Protein Unc-13, C2B domain | Domain | |
IPR014772 | Mammalian uncoordinated homology 13, domain 2 | Domain | |
IPR027080 | Protein Unc-13 | Family | |
IPR000008 | C2 domain | Domain | |
IPR002219 | Protein kinase C-like, phorbol ester/diacylglycerol-binding domain | Domain | |
IPR035892 | C2 domain superfamily | Homologous Superfamily | |
IPR010439 | MUN domain | Domain | |
IPR046349 | C1-like domain superfamily | Homologous Superfamily | |
IPR017455 | Zinc finger, FYVE-related | Domain | |
IPR013083 | Zinc finger, RING/FYVE/PHD-type | Homologous Superfamily | |
IPR041282 | FYVE-type zinc finger | Domain | |
IPR000008 | C2 domain | Domain | |
IPR010911 | Rab-binding domain | Domain | |
IPR011011 | Zinc finger, FYVE/PHD-type | Homologous Superfamily | |
IPR036034 | PDZ superfamily | Homologous Superfamily | |
IPR039032 | Rim-like | Family | |
IPR035892 | C2 domain superfamily | Homologous Superfamily | |
IPR001478 | PDZ domain | Domain |