2BWE
The crystal structure of the complex between the UBA and UBL domains of Dsk2
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | UBA-like | 8038739 | 3001235 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | UBA-like | 8038739 | 3001235 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | UBA-like | 8038739 | 3001235 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | UBA-like | 8038739 | 3001235 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | UBA-like | 8038739 | 3001235 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | UBA-like | 8038739 | 3001235 | SCOP2B (2022-06-29) |
G | SCOP2B Superfamily | UBA-like | 8038739 | 3001235 | SCOP2B (2022-06-29) |
H | SCOP2B Superfamily | UBA-like | 8038739 | 3001235 | SCOP2B (2022-06-29) |
I | SCOP2B Superfamily | UBA-like | 8038739 | 3001235 | SCOP2B (2022-06-29) |
J | SCOP2B Superfamily | UBA-like | 8038739 | 3001235 | SCOP2B (2022-06-29) |
K | SCOP2B Superfamily | UBA-like | 8038739 | 3001235 | SCOP2B (2022-06-29) |
L | SCOP2B Superfamily | UBA-like | 8038739 | 3001235 | SCOP2B (2022-06-29) |
M | SCOP2B Superfamily | UBA-like | 8038739 | 3001235 | SCOP2B (2022-06-29) |
N | SCOP2B Superfamily | UBA-like | 8038739 | 3001235 | SCOP2B (2022-06-29) |
O | SCOP2B Superfamily | UBA-like | 8038739 | 3001235 | SCOP2B (2022-06-29) |
P | SCOP2B Superfamily | UBA-like | 8038739 | 3001235 | SCOP2B (2022-06-29) |
Q | SCOP2B Superfamily | UBA-like | 8038739 | 3001235 | SCOP2B (2022-06-29) |
R | SCOP2B Superfamily | UBA-like | 8038739 | 3001235 | SCOP2B (2022-06-29) |
S | SCOP2B Superfamily | Ubiquitin-like | 8038778 | 3000157 | SCOP2B (2022-06-29) |
T | SCOP2B Superfamily | Ubiquitin-like | 8038778 | 3000157 | SCOP2B (2022-06-29) |
U | SCOP2B Superfamily | Ubiquitin-like | 8038778 | 3000157 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | UBA | e2bweA1 | A: alpha arrays | X: RuvA-C | H: RuvA-C, UBA, CRAL/TRIO-N, HBS1 (From Topology) | T: RuvA-C, UBA, CRAL/TRIO-N, HBS1 | F: UBA | ECOD (1.6) |
B | UBA | e2bweB1 | A: alpha arrays | X: RuvA-C | H: RuvA-C, UBA, CRAL/TRIO-N, HBS1 (From Topology) | T: RuvA-C, UBA, CRAL/TRIO-N, HBS1 | F: UBA | ECOD (1.6) |
C | UBA | e2bweC1 | A: alpha arrays | X: RuvA-C | H: RuvA-C, UBA, CRAL/TRIO-N, HBS1 (From Topology) | T: RuvA-C, UBA, CRAL/TRIO-N, HBS1 | F: UBA | ECOD (1.6) |
D | UBA | e2bweD1 | A: alpha arrays | X: RuvA-C | H: RuvA-C, UBA, CRAL/TRIO-N, HBS1 (From Topology) | T: RuvA-C, UBA, CRAL/TRIO-N, HBS1 | F: UBA | ECOD (1.6) |
E | UBA | e2bweE1 | A: alpha arrays | X: RuvA-C | H: RuvA-C, UBA, CRAL/TRIO-N, HBS1 (From Topology) | T: RuvA-C, UBA, CRAL/TRIO-N, HBS1 | F: UBA | ECOD (1.6) |
F | UBA | e2bweF1 | A: alpha arrays | X: RuvA-C | H: RuvA-C, UBA, CRAL/TRIO-N, HBS1 (From Topology) | T: RuvA-C, UBA, CRAL/TRIO-N, HBS1 | F: UBA | ECOD (1.6) |
G | UBA | e2bweG1 | A: alpha arrays | X: RuvA-C | H: RuvA-C, UBA, CRAL/TRIO-N, HBS1 (From Topology) | T: RuvA-C, UBA, CRAL/TRIO-N, HBS1 | F: UBA | ECOD (1.6) |
H | UBA | e2bweH1 | A: alpha arrays | X: RuvA-C | H: RuvA-C, UBA, CRAL/TRIO-N, HBS1 (From Topology) | T: RuvA-C, UBA, CRAL/TRIO-N, HBS1 | F: UBA | ECOD (1.6) |
I | UBA | e2bweI1 | A: alpha arrays | X: RuvA-C | H: RuvA-C, UBA, CRAL/TRIO-N, HBS1 (From Topology) | T: RuvA-C, UBA, CRAL/TRIO-N, HBS1 | F: UBA | ECOD (1.6) |
J | UBA | e2bweJ1 | A: alpha arrays | X: RuvA-C | H: RuvA-C, UBA, CRAL/TRIO-N, HBS1 (From Topology) | T: RuvA-C, UBA, CRAL/TRIO-N, HBS1 | F: UBA | ECOD (1.6) |
K | UBA | e2bweK1 | A: alpha arrays | X: RuvA-C | H: RuvA-C, UBA, CRAL/TRIO-N, HBS1 (From Topology) | T: RuvA-C, UBA, CRAL/TRIO-N, HBS1 | F: UBA | ECOD (1.6) |
L | UBA | e2bweL1 | A: alpha arrays | X: RuvA-C | H: RuvA-C, UBA, CRAL/TRIO-N, HBS1 (From Topology) | T: RuvA-C, UBA, CRAL/TRIO-N, HBS1 | F: UBA | ECOD (1.6) |
M | UBA | e2bweM1 | A: alpha arrays | X: RuvA-C | H: RuvA-C, UBA, CRAL/TRIO-N, HBS1 (From Topology) | T: RuvA-C, UBA, CRAL/TRIO-N, HBS1 | F: UBA | ECOD (1.6) |
N | UBA | e2bweN1 | A: alpha arrays | X: RuvA-C | H: RuvA-C, UBA, CRAL/TRIO-N, HBS1 (From Topology) | T: RuvA-C, UBA, CRAL/TRIO-N, HBS1 | F: UBA | ECOD (1.6) |
O | UBA | e2bweO1 | A: alpha arrays | X: RuvA-C | H: RuvA-C, UBA, CRAL/TRIO-N, HBS1 (From Topology) | T: RuvA-C, UBA, CRAL/TRIO-N, HBS1 | F: UBA | ECOD (1.6) |
P | UBA | e2bweP1 | A: alpha arrays | X: RuvA-C | H: RuvA-C, UBA, CRAL/TRIO-N, HBS1 (From Topology) | T: RuvA-C, UBA, CRAL/TRIO-N, HBS1 | F: UBA | ECOD (1.6) |
Q | UBA | e2bweQ1 | A: alpha arrays | X: RuvA-C | H: RuvA-C, UBA, CRAL/TRIO-N, HBS1 (From Topology) | T: RuvA-C, UBA, CRAL/TRIO-N, HBS1 | F: UBA | ECOD (1.6) |
R | UBA | e2bweR1 | A: alpha arrays | X: RuvA-C | H: RuvA-C, UBA, CRAL/TRIO-N, HBS1 (From Topology) | T: RuvA-C, UBA, CRAL/TRIO-N, HBS1 | F: UBA | ECOD (1.6) |
S | ubiquitin_2 | e2bweS1 | A: a+b two layers | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: ubiquitin_2 | ECOD (1.6) |
T | ubiquitin_2 | e2bweT1 | A: a+b two layers | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: ubiquitin_2 | ECOD (1.6) |
U | ubiquitin_2 | e2bweU1 | A: a+b two layers | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: ubiquitin_2 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00240 | Ubiquitin family (ubiquitin) | Ubiquitin family | This family contains a number of ubiquitin-like proteins: SUMO (smt3 homologue) (see Swiss:Q02724), Nedd8 (see Swiss:P29595), Elongin B (see Swiss:Q15370), Rub1 (see Swiss:Q9SHE7), and Parkin (see Swiss:O60260). A number of them are thought to carry ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR019954 | Ubiquitin conserved site | Conserved Site | |
IPR000626 | Ubiquitin-like domain | Domain | |
IPR015496 | Ubiquilin | Family | |
IPR029071 | Ubiquitin-like domain superfamily | Homologous Superfamily | |
IPR009060 | UBA-like superfamily | Homologous Superfamily | |
IPR015940 | Ubiquitin-associated domain | Domain | |
IPR006636 | Heat shock chaperonin-binding | Domain | |
IPR019954 | Ubiquitin conserved site | Conserved Site | |
IPR000626 | Ubiquitin-like domain | Domain | |
IPR015496 | Ubiquilin | Family | |
IPR029071 | Ubiquitin-like domain superfamily | Homologous Superfamily | |
IPR009060 | UBA-like superfamily | Homologous Superfamily | |
IPR015940 | Ubiquitin-associated domain | Domain | |
IPR006636 | Heat shock chaperonin-binding | Domain |