2BQ1
Ribonucleotide reductase class 1b holocomplex R1E,R2F from Salmonella typhimurium
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A [auth E] | SCOP2B Superfamily | PFL-like glycyl radical enzymes | 8038108 | 3001069 | SCOP2B (2022-06-29) |
A [auth E] | SCOP2B Superfamily | R1 subunit of ribonucleotide reductase, N-terminal domain | 8038107 | 3000927 | SCOP2B (2022-06-29) |
B [auth F] | SCOP2B Superfamily | PFL-like glycyl radical enzymes | 8038108 | 3001069 | SCOP2B (2022-06-29) |
B [auth F] | SCOP2B Superfamily | R1 subunit of ribonucleotide reductase, N-terminal domain | 8038107 | 3000927 | SCOP2B (2022-06-29) |
C [auth I] | SCOP2B Superfamily | Ferritin-like | 8037036 | 3001658 | SCOP2B (2022-06-29) |
D [auth J] | SCOP2B Superfamily | Ferritin-like | 8037036 | 3001658 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth E] | RNR_N | e2bq1E1 | A: alpha arrays | X: Alpha helical domain of ribonucleotide reductases (From Topology) | H: Alpha helical domain of ribonucleotide reductases (From Topology) | T: Alpha helical domain of ribonucleotide reductases | F: RNR_N | ECOD (1.6) |
A [auth E] | Ribonuc_red_lgC | e2bq1E2 | A: a/b barrels | X: Ten stranded beta/alpha barrel (From Topology) | H: Ten stranded beta/alpha barrel (From Topology) | T: Ten stranded beta/alpha barrel | F: Ribonuc_red_lgC | ECOD (1.6) |
B [auth F] | RNR_N | e2bq1F1 | A: alpha arrays | X: Alpha helical domain of ribonucleotide reductases (From Topology) | H: Alpha helical domain of ribonucleotide reductases (From Topology) | T: Alpha helical domain of ribonucleotide reductases | F: RNR_N | ECOD (1.6) |
B [auth F] | Ribonuc_red_lgC | e2bq1F2 | A: a/b barrels | X: Ten stranded beta/alpha barrel (From Topology) | H: Ten stranded beta/alpha barrel (From Topology) | T: Ten stranded beta/alpha barrel | F: Ribonuc_red_lgC | ECOD (1.6) |
C [auth I] | Ribonuc_red_sm | e2bq1I1 | A: alpha bundles | X: Ferritin/Heme oxygenase/4-helical cytokines | H: Ferritin/Heme oxygenase | T: Heme oxygenase/Ribonucleotide reductase | F: Ribonuc_red_sm | ECOD (1.6) |
D [auth J] | Ribonuc_red_sm | e2bq1J1 | A: alpha bundles | X: Ferritin/Heme oxygenase/4-helical cytokines | H: Ferritin/Heme oxygenase | T: Heme oxygenase/Ribonucleotide reductase | F: Ribonuc_red_sm | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A [auth E] | 3.20.70.20 | Alpha Beta | Alpha-Beta Barrel | Anaerobic Ribonucleotide-triphosphate Reductase Large Chain | CATH (4.3.0) | |
A [auth E] | 1.10.1650.20 | Mainly Alpha | Orthogonal Bundle | 50s Ribosomal Protein L19e, Chain O, domain 1 | CATH (4.3.0) | |
B [auth F] | 3.20.70.20 | Alpha Beta | Alpha-Beta Barrel | Anaerobic Ribonucleotide-triphosphate Reductase Large Chain | CATH (4.3.0) | |
B [auth F] | 1.10.1650.20 | Mainly Alpha | Orthogonal Bundle | 50s Ribosomal Protein L19e, Chain O, domain 1 | CATH (4.3.0) | |
C [auth I] | 1.10.620.20 | Mainly Alpha | Orthogonal Bundle | Ribonucleotide Reductase, subunit A | Ribonucleotide Reductase, subunit A | CATH (4.3.0) |
D [auth J] | 1.10.620.20 | Mainly Alpha | Orthogonal Bundle | Ribonucleotide Reductase, subunit A | Ribonucleotide Reductase, subunit A | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth E], B [auth F] | PF02867 | Ribonucleotide reductase, barrel domain (Ribonuc_red_lgC) | Ribonucleotide reductase, barrel domain | - | Family |
A [auth E], B [auth F] | PF08343 | Ribonucleotide reductase N-terminal (RNR_N) | Ribonucleotide reductase N-terminal | - | Family |
A [auth E], B [auth F] | PF00317 | Ribonucleotide reductase, all-alpha domain (Ribonuc_red_lgN) | Ribonucleotide reductase, all-alpha domain | - | Domain |
C [auth I], D [auth J] | PF00268 | Ribonucleotide reductase, small chain (Ribonuc_red_sm) | Ribonucleotide reductase, small chain | - | Domain |