2BM5
The Structure of MfpA (Rv3361c, P21 Crystal form). The Pentapeptide Repeat Protein from Mycobacterium tuberculosis Folds as A Right- handed Quadrilateral Beta-helix.
External Resource: Annotation
- Domain Annotation: SCOP/SCOPe Classification
- Domain Annotation: SCOP2 Classification
- Domain Annotation: ECOD Classification
- Domain Annotation: CATH
- AMR Gene: CARD Annotation
- AMR Gene Family: CARD Annotation
- Protein Family Annotation
- Gene Ontology: Gene Product Annotation
- InterPro: Protein Family Classification
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d2bm5a_ | All beta proteins | Single-stranded right-handed beta-helix | Pentapeptide repeat-like | Pentapeptide repeats | automated matches | (Mycobacterium tuberculosis H37Rv ) [TaxId: 83332 ], | SCOPe (2.08) |
B | d2bm5b_ | All beta proteins | Single-stranded right-handed beta-helix | Pentapeptide repeat-like | Pentapeptide repeats | automated matches | (Mycobacterium tuberculosis H37Rv ) [TaxId: 83332 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | Pentapeptide repeat-like | 8025948 | 4002075 | SCOP2 (2021-05-27) |
A | SCOP2 Superfamily | Pentapeptide repeat-like | 8038327 | 3000796 | SCOP2 (2021-05-27) |
B | SCOP2B Superfamily | Pentapeptide repeat-like | 8038327 | 3000796 | SCOP2B (2021-05-27) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF13599 | e2bm5A1 | A: beta duplicates or obligate multimers | X: Single-stranded right-handed beta-helix | H: Pentapeptide repeats (From Topology) | T: Pentapeptide repeats | F: PF13599 | ECOD (1.6) |
B | PF13599 | e2bm5B1 | A: beta duplicates or obligate multimers | X: Single-stranded right-handed beta-helix | H: Pentapeptide repeats (From Topology) | T: Pentapeptide repeats | F: PF13599 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.160.20.80 | Mainly Beta | 3 Solenoid | Pectate Lyase C-like | E3 ubiquitin-protein ligase SopA | CATH (4.3.0) |
B | 2.160.20.80 | Mainly Beta | 3 Solenoid | Pectate Lyase C-like | E3 ubiquitin-protein ligase SopA | CATH (4.3.0) |
AMR Gene: CARD Annotation CARD Database Homepage
Chains | Accession | Short Name | Description | Provenance Source (Version) |
---|---|---|---|---|
ARO:3003035 | mfpA | mfpA is a qnr homolog and a pentapeptide repeat protein that confers resistance to fluoroquinolones in Mycolicibacterium smegmatis. | CARD (3.2.9) |
AMR Gene Family: CARD Annotation CARD Database Homepage
Chains | Accession | Gene Family | Drug Class | Resistance Machanism | Provenance Source (Version) |
---|---|---|---|---|---|
ARO:3000419 | quinolone resistance protein (qnr) | fluoroquinolone antibiotic | antibiotic target protection | CARD (3.2.9) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00805 | Pentapeptide repeats (8 copies) (Pentapeptide) | Pentapeptide repeats (8 copies) | - | Repeat | |
PF13599 | Pentapeptide repeats (9 copies) (Pentapeptide_4) | Pentapeptide repeats (9 copies) | - | Repeat |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR001646 | Pentapeptide repeat | Repeat |