2AYE
Crystal structure of the unliganded E2 DNA Binding Domain from HPV6a
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Viral DNA-binding domain | 8040442 | 3001239 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Viral DNA-binding domain | 8040442 | 3001239 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Viral DNA-binding domain | 8040442 | 3001239 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Viral DNA-binding domain | 8040442 | 3001239 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | Viral DNA-binding domain | 8040442 | 3001239 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | Viral DNA-binding domain | 8040442 | 3001239 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PPV_E2_C | e2ayeA1 | A: a+b two layers | X: Alpha-beta plaits | H: Viral DNA-binding domain (From Topology) | T: Viral DNA-binding domain | F: PPV_E2_C | ECOD (1.6) |
B | PPV_E2_C | e2ayeB1 | A: a+b two layers | X: Alpha-beta plaits | H: Viral DNA-binding domain (From Topology) | T: Viral DNA-binding domain | F: PPV_E2_C | ECOD (1.6) |
C | PPV_E2_C | e2ayeC1 | A: a+b two layers | X: Alpha-beta plaits | H: Viral DNA-binding domain (From Topology) | T: Viral DNA-binding domain | F: PPV_E2_C | ECOD (1.6) |
D | PPV_E2_C | e2ayeD1 | A: a+b two layers | X: Alpha-beta plaits | H: Viral DNA-binding domain (From Topology) | T: Viral DNA-binding domain | F: PPV_E2_C | ECOD (1.6) |
E | PPV_E2_C | e2ayeE1 | A: a+b two layers | X: Alpha-beta plaits | H: Viral DNA-binding domain (From Topology) | T: Viral DNA-binding domain | F: PPV_E2_C | ECOD (1.6) |
F | PPV_E2_C | e2ayeF1 | A: a+b two layers | X: Alpha-beta plaits | H: Viral DNA-binding domain (From Topology) | T: Viral DNA-binding domain | F: PPV_E2_C | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.30.70.330 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | RRM (RNA recognition motif) domain | CATH (4.3.0) |
B | 3.30.70.330 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | RRM (RNA recognition motif) domain | CATH (4.3.0) |
C | 3.30.70.330 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | RRM (RNA recognition motif) domain | CATH (4.3.0) |
D | 3.30.70.330 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | RRM (RNA recognition motif) domain | CATH (4.3.0) |
E | 3.30.70.330 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | RRM (RNA recognition motif) domain | CATH (4.3.0) |
F | 3.30.70.330 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | RRM (RNA recognition motif) domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR033668 | Regulatory protein E2 | Family | |
IPR042503 | E2 regulatory, transactivation domain, subdomain 1 | Homologous Superfamily | |
IPR001866 | Papillomavirus E2, N-terminal | Domain | |
IPR036050 | E2 regulatory, transactivation domain | Homologous Superfamily | |
IPR042504 | E2 regulatory, transactivation domain, subdomain 2 | Homologous Superfamily | |
IPR012677 | Nucleotide-binding alpha-beta plait domain superfamily | Homologous Superfamily | |
IPR000427 | Papillomavirus E2, C-terminal | Domain | |
IPR035975 | E2/EBNA1, C-terminal | Homologous Superfamily |