Skip to main content

 27UR | pdb_000027ur

In situ structure of the side-by-side PSII-LHCII dimer from Oryza sativa (composite)

External Resource: Annotation


Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Chlorophyll a-b binding protein 2, chloroplastic-
D [auth 03],
H [auth 07],
N [auth 13],
R [auth 17]		Chlorophyll a/b-binding protein- - -
E [auth 04],
I [auth 08],
O [auth 14],
S [auth 18]		Chlorophyll a-b binding protein, chloroplastic-
RC [auth 2a],
SB [auth 2A],
TA [auth 1a],
U [auth 1A]		Photosystem II protein D1
SC [auth 2b],
TB [auth 2B],
UA [auth 1b],
V [auth 1B]		Photosystem II CP47 reaction center protein
TC [auth 2c],
UB [auth 2C],
VA [auth 1c],
W [auth 1C]		Photosystem II CP43 reaction center protein
UC [auth 2d],
VB [auth 2D],
WA [auth 1d],
X [auth 1D]		Photosystem II D2 protein
VC [auth 2e],
WB [auth 2E],
XA [auth 1e],
Y [auth 1E]		Cytochrome b559 subunit alpha
WC [auth 2f],
XB [auth 2F],
YA [auth 1f],
Z [auth 1F]		Cytochrome b559 subunit beta
AB [auth 1h],
BA [auth 1H],
YC [auth 2h],
ZB [auth 2H]		Photosystem II reaction center protein H
AC [auth 2I],
BB [auth 1i],
CA [auth 1I],
ZC [auth 2i]		Photosystem II reaction center protein I-
AD [auth 2j],
BC [auth 2J],
CB [auth 1j],
DA [auth 1J]		Photosystem II reaction center protein J-
BD [auth 2k],
CC [auth 2K],
DB [auth 1k],
EA [auth 1K]		Photosystem II reaction center protein K-
CD [auth 2l],
DC [auth 2L],
EB [auth 1l],
FA [auth 1L]		Photosystem II reaction center protein L-
DD [auth 2m],
EC [auth 2M],
FB [auth 1m],
GA [auth 1M]		Photosystem II reaction center protein M-
FD [auth 2o],
GC [auth 2O],
HB [auth 1o],
IA [auth 1O]		33 kDa subunit of oxygen evolving system of photosystem II
GD [auth 2p],
HC [auth 2P],
IB [auth 1p],
JA [auth 1P]		23 kDa subunit of oxygen evolving system of photosystem II
HD [auth 2r],
IC [auth 2R],
JB [auth 1r],
KA [auth 1R]		Chlorophyll a-b binding protein, chloroplastic
ID [auth 2s],
JC [auth 2S],
KB [auth 1s],
LA [auth 1S]		Chlorophyll a-b binding protein, chloroplastic-
JD [auth 2t],
KC [auth 2T],
LB [auth 1t],
MA [auth 1T]		Photosystem II reaction center protein T-
KD [auth 2u],
LC [auth 2U],
MB [auth 1u],
NA [auth 1U]		Os02g0581100 protein- - -
LD [auth 2v],
MC [auth 2V],
NB [auth 1v],
OA [auth 1V]		Photosystem II 10 kDa polypeptide, chloroplastic-
MD [auth 2w],
NC [auth 2W],
OB [auth 1w],
PA [auth 1W]		Photosystem II reaction center W protein, chloroplastic-
ND [auth 2x],
OC [auth 2X],
PB [auth 1x],
QA [auth 1X]		Os07g0673550 protein-
OD [auth 2y],
PC [auth 2Y],
QB [auth 1y],
RA [auth 1Y]		cDNA clone:001-024-H10, full insert sequence- - -
PD [auth 2z],
QC [auth 2Z],
RB [auth 1z],
SA [auth 1Z]		Photosystem II reaction center protein Z-

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR001344Chlorophyll A-B binding protein, plant and chromistaFamily
IPR022796Chlorophyll A-B binding proteinFamily
D [auth 03],
H [auth 07],
N [auth 13],
R [auth 17]		IPR001344Chlorophyll A-B binding protein, plant and chromistaFamily
D [auth 03],
H [auth 07],
N [auth 13],
R [auth 17]		IPR022796Chlorophyll A-B binding proteinFamily
E [auth 04],
I [auth 08],
O [auth 14],
S [auth 18]		IPR001344Chlorophyll A-B binding protein, plant and chromistaFamily
E [auth 04],
I [auth 08],
O [auth 14],
S [auth 18]		IPR022796Chlorophyll A-B binding proteinFamily
RC [auth 2a],
SB [auth 2A],
TA [auth 1a],
U [auth 1A]		IPR036854Photosystem II protein D1/D2 superfamilyHomologous Superfamily
RC [auth 2a],
SB [auth 2A],
TA [auth 1a],
U [auth 1A]		IPR005867Photosystem II protein D1Family
RC [auth 2a],
SB [auth 2A],
TA [auth 1a],
U [auth 1A]		IPR000484Photosynthetic reaction centre, L/MFamily
RC [auth 2a],
SB [auth 2A],
TA [auth 1a],
U [auth 1A]		IPR055265Photosynthetic reaction centre, L/M, conserved siteConserved Site
RC [auth 2a],
SB [auth 2A],
TA [auth 1a],
U [auth 1A]		IPR055266Photosystem II protein D1/D2Family
SC [auth 2b],
TB [auth 2B],
UA [auth 1b],
V [auth 1B]		IPR036001Photosystem antenna protein-like superfamilyHomologous Superfamily
SC [auth 2b],
TB [auth 2B],
UA [auth 1b],
V [auth 1B]		IPR000932Photosystem antenna protein-likeFamily
SC [auth 2b],
TB [auth 2B],
UA [auth 1b],
V [auth 1B]		IPR017486Photosystem II CP47 reaction centre proteinFamily
TC [auth 2c],
UB [auth 2C],
VA [auth 1c],
W [auth 1C]		IPR036001Photosystem antenna protein-like superfamilyHomologous Superfamily
TC [auth 2c],
UB [auth 2C],
VA [auth 1c],
W [auth 1C]		IPR000932Photosystem antenna protein-likeFamily
TC [auth 2c],
UB [auth 2C],
VA [auth 1c],
W [auth 1C]		IPR005869Photosystem II CP43 reaction centre proteinFamily
TC [auth 2c],
UB [auth 2C],
VA [auth 1c],
W [auth 1C]		IPR044900Photosystem II CP43 reaction centre protein superfamilyHomologous Superfamily
UC [auth 2d],
VB [auth 2D],
WA [auth 1d],
X [auth 1D]		IPR036854Photosystem II protein D1/D2 superfamilyHomologous Superfamily
UC [auth 2d],
VB [auth 2D],
WA [auth 1d],
X [auth 1D]		IPR005868Photosystem II D2Family
UC [auth 2d],
VB [auth 2D],
WA [auth 1d],
X [auth 1D]		IPR000484Photosynthetic reaction centre, L/MFamily
UC [auth 2d],
VB [auth 2D],
WA [auth 1d],
X [auth 1D]		IPR055265Photosynthetic reaction centre, L/M, conserved siteConserved Site
UC [auth 2d],
VB [auth 2D],
WA [auth 1d],
X [auth 1D]		IPR055266Photosystem II protein D1/D2Family
VC [auth 2e],
WB [auth 2E],
XA [auth 1e],
Y [auth 1E]		IPR013081Photosystem II cytochrome b559, N-terminalDomain
VC [auth 2e],
WB [auth 2E],
XA [auth 1e],
Y [auth 1E]		IPR006217Photosystem II cytochrome b559, alpha subunitFamily
VC [auth 2e],
WB [auth 2E],
XA [auth 1e],
Y [auth 1E]		IPR013082Photosystem II cytochrome b559, alpha subunit, lumenal regionDomain
VC [auth 2e],
WB [auth 2E],
XA [auth 1e],
Y [auth 1E]		IPR037025Photosystem II cytochrome b559, alpha subunit superfamilyHomologous Superfamily
VC [auth 2e],
WB [auth 2E],
XA [auth 1e],
Y [auth 1E]		IPR006216Photosystem II cytochrome b559, conserved siteConserved Site
WC [auth 2f],
XB [auth 2F],
YA [auth 1f],
Z [auth 1F]		IPR006241Photosystem II cytochrome b559, beta subunitFamily
WC [auth 2f],
XB [auth 2F],
YA [auth 1f],
Z [auth 1F]		IPR013081Photosystem II cytochrome b559, N-terminalDomain
WC [auth 2f],
XB [auth 2F],
YA [auth 1f],
Z [auth 1F]		IPR006216Photosystem II cytochrome b559, conserved siteConserved Site
AB [auth 1h],
BA [auth 1H],
YC [auth 2h],
ZB [auth 2H]		IPR036863Photosystem II reaction centre protein H superfamilyHomologous Superfamily
AB [auth 1h],
BA [auth 1H],
YC [auth 2h],
ZB [auth 2H]		IPR001056Photosystem II reaction centre protein HFamily
AC [auth 2I],
BB [auth 1i],
CA [auth 1I],
ZC [auth 2i]		IPR037271Photosystem II PsbI superfamilyHomologous Superfamily
AC [auth 2I],
BB [auth 1i],
CA [auth 1I],
ZC [auth 2i]		IPR003686Photosystem II PsbIFamily
AD [auth 2j],
BC [auth 2J],
CB [auth 1j],
DA [auth 1J]		IPR002682Photosystem II PsbJFamily
AD [auth 2j],
BC [auth 2J],
CB [auth 1j],
DA [auth 1J]		IPR037267Photosystem II PsbJ superfamilyHomologous Superfamily
BD [auth 2k],
CC [auth 2K],
DB [auth 1k],
EA [auth 1K]		IPR037270Photosystem II PsbK superfamilyHomologous Superfamily
BD [auth 2k],
CC [auth 2K],
DB [auth 1k],
EA [auth 1K]		IPR003687Photosystem II PsbKFamily
CD [auth 2l],
DC [auth 2L],
EB [auth 1l],
FA [auth 1L]		IPR003372Photosystem II PsbLFamily
CD [auth 2l],
DC [auth 2L],
EB [auth 1l],
FA [auth 1L]		IPR037266Photosystem II PsbL superfamilyHomologous Superfamily
DD [auth 2m],
EC [auth 2M],
FB [auth 1m],
GA [auth 1M]		IPR007826Photosystem II PsbMFamily
DD [auth 2m],
EC [auth 2M],
FB [auth 1m],
GA [auth 1M]		IPR037269Photosystem II PsbM superfamilyHomologous Superfamily
FD [auth 2o],
GC [auth 2O],
HB [auth 1o],
IA [auth 1O]		IPR011250Outer membrane protein/outer membrane enzyme PagP-like, beta-barrel superfamilyHomologous Superfamily
FD [auth 2o],
GC [auth 2O],
HB [auth 1o],
IA [auth 1O]		IPR002628Photosystem II extrinsic protein OFamily
GD [auth 2p],
HC [auth 2P],
IB [auth 1p],
JA [auth 1P]		IPR006311Twin-arginine translocation pathway, signal sequenceConserved Site
GD [auth 2p],
HC [auth 2P],
IB [auth 1p],
JA [auth 1P]		IPR002683PsbP, C-terminalDomain
GD [auth 2p],
HC [auth 2P],
IB [auth 1p],
JA [auth 1P]		IPR016123Mog1/PsbP, alpha/beta/alpha sandwichHomologous Superfamily
HD [auth 2r],
IC [auth 2R],
JB [auth 1r],
KA [auth 1R]		IPR001344Chlorophyll A-B binding protein, plant and chromistaFamily
HD [auth 2r],
IC [auth 2R],
JB [auth 1r],
KA [auth 1R]		IPR022796Chlorophyll A-B binding proteinFamily
ID [auth 2s],
JC [auth 2S],
KB [auth 1s],
LA [auth 1S]		IPR001344Chlorophyll A-B binding protein, plant and chromistaFamily
ID [auth 2s],
JC [auth 2S],
KB [auth 1s],
LA [auth 1S]		IPR022796Chlorophyll A-B binding proteinFamily
JD [auth 2t],
KC [auth 2T],
LB [auth 1t],
MA [auth 1T]		IPR001743Photosystem II PsbTFamily
JD [auth 2t],
KC [auth 2T],
LB [auth 1t],
MA [auth 1T]		IPR037268Photosystem II PsbT superfamilyHomologous Superfamily
KD [auth 2u],
LC [auth 2U],
MB [auth 1u],
NA [auth 1U]		IPR040296Photosystem II 5kDa protein, chloroplasticFamily
LD [auth 2v],
MC [auth 2V],
NB [auth 1v],
OA [auth 1V]		IPR006814Photosystem II PsbRFamily
MD [auth 2w],
NC [auth 2W],
OB [auth 1w],
PA [auth 1W]		IPR009806Photosystem II PsbW, class 2Family
ND [auth 2x],
OC [auth 2X],
PB [auth 1x],
QA [auth 1X]		IPR009518Photosystem II PsbXFamily
OD [auth 2y],
PC [auth 2Y],
QB [auth 1y],
RA [auth 1Y]		IPR038760Photosystem II PsbY, plantFamily
OD [auth 2y],
PC [auth 2Y],
QB [auth 1y],
RA [auth 1Y]		IPR009388Photosystem II PsbYFamily
PD [auth 2z],
QC [auth 2Z],
RB [auth 1z],
SA [auth 1Z]		IPR036512Photosystem II PsbZ superfamilyHomologous Superfamily
PD [auth 2z],
QC [auth 2Z],
RB [auth 1z],
SA [auth 1Z]		IPR002644Photosystem II PsbZ, reaction centreFamily