1ZSE
RNA stemloop from bacteriophage Qbeta complexed with an N87S mutant MS2 Capsid
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
D [auth C] | SCOP2B Superfamily | RNA bacteriophage capsid protein | 8038606 | 3001853 | SCOP2B (2022-06-29) |
B [auth A] | SCOP2B Superfamily | RNA bacteriophage capsid protein | 8038606 | 3001853 | SCOP2B (2022-06-29) |
C [auth B] | SCOP2B Superfamily | RNA bacteriophage capsid protein | 8038606 | 3001853 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
D [auth C] | Levi_coat | e1zseC1 | A: a+b two layers | X: RNA bacteriophage capsid protein (From Topology) | H: RNA bacteriophage capsid protein (From Topology) | T: RNA bacteriophage capsid protein | F: Levi_coat | ECOD (1.6) |
B [auth A] | Levi_coat | e1zseA1 | A: a+b two layers | X: RNA bacteriophage capsid protein (From Topology) | H: RNA bacteriophage capsid protein (From Topology) | T: RNA bacteriophage capsid protein | F: Levi_coat | ECOD (1.6) |
C [auth B] | Levi_coat | e1zseB1 | A: a+b two layers | X: RNA bacteriophage capsid protein (From Topology) | H: RNA bacteriophage capsid protein (From Topology) | T: RNA bacteriophage capsid protein | F: Levi_coat | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
D [auth C] | 3.30.380.10 | Alpha Beta | 2-Layer Sandwich | MS2 Viral Coat Protein | MS2 Viral Coat Protein | CATH (4.3.0) |
B [auth A] | 3.30.380.10 | Alpha Beta | 2-Layer Sandwich | MS2 Viral Coat Protein | MS2 Viral Coat Protein | CATH (4.3.0) |
C [auth B] | 3.30.380.10 | Alpha Beta | 2-Layer Sandwich | MS2 Viral Coat Protein | MS2 Viral Coat Protein | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
B [auth A], C [auth B], D [auth C] | PF01819 | Levivirus coat protein (Levi_coat) | Levivirus coat protein | The Levivirus coat protein forms the bacteriophage coat that encapsidates the viral RNA. 180 copies of this protein form the virion shell. The MS2 bacteriophage coat protein controls two distinct processes: sequence-specific RNA encapsidation and re ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
B [auth A], C [auth B], D [auth C] | IPR002703 | Levivirus coat protein | Family |
B [auth A], C [auth B], D [auth C] | IPR015954 | Bacteriophage RNA-type, capsid | Homologous Superfamily |