1ZRO
Crystal structure of EBA-175 Region II (RII) crystallized in the presence of (alpha)2,3-sialyllactose
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d1zroa1 | All alpha proteins | Duffy binding domain-like | Duffy binding domain-like | Duffy binding domain | Erythrocyte binding antigen region II | malaria parasite P. falciparum (Plasmodium falciparum ) [TaxId: 5833 ], | SCOPe (2.08) |
B | d1zrob1 | All alpha proteins | Duffy binding domain-like | Duffy binding domain-like | Duffy binding domain | Erythrocyte binding antigen region II | malaria parasite P. falciparum (Plasmodium falciparum ) [TaxId: 5833 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | Duffy binding domain | 8023790 | 4001588 | SCOP2 (2021-05-27) |
A | SCOP2 Family | Duffy binding domain | 8023791 | 4001588 | SCOP2 (2021-05-27) |
A | SCOP2 Superfamily | Duffy binding domain-like | 8036170 | 3001914 | SCOP2 (2021-05-27) |
A | SCOP2 Superfamily | Duffy binding domain-like | 8036171 | 3001914 | SCOP2 (2021-05-27) |
B | SCOP2B Superfamily | Duffy binding domain-like | 8036171 | 3001914 | SCOP2B (2021-05-27) |
B | SCOP2B Superfamily | Duffy binding domain-like | 8036170 | 3001914 | SCOP2B (2021-05-27) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF05424 | e1zroA1 | A: alpha bundles | X: Duffy-binding-like domain, N-terminal subdomain (From Topology) | H: Duffy-binding-like domain, N-terminal subdomain (From Topology) | T: Duffy-binding-like domain, N-terminal subdomain | F: PF05424 | ECOD (1.6) |
A | F_UNCLASSIFIED | e1zroA4 | A: alpha bundles | X: Duffy-binding-like domain, C-terminal subdomain (From Topology) | H: Duffy-binding-like domain, C-terminal subdomain (From Topology) | T: Duffy-binding-like domain, C-terminal subdomain | F: F_UNCLASSIFIED | ECOD (1.6) |
A | PF03011 | e1zroA3 | A: alpha bundles | X: Duffy-binding-like domain, C-terminal subdomain (From Topology) | H: Duffy-binding-like domain, C-terminal subdomain (From Topology) | T: Duffy-binding-like domain, C-terminal subdomain | F: PF03011 | ECOD (1.6) |
B | PF05424 | e1zroB2 | A: alpha bundles | X: Duffy-binding-like domain, N-terminal subdomain (From Topology) | H: Duffy-binding-like domain, N-terminal subdomain (From Topology) | T: Duffy-binding-like domain, N-terminal subdomain | F: PF05424 | ECOD (1.6) |
B | F_UNCLASSIFIED | e1zroB1 | A: alpha bundles | X: Duffy-binding-like domain, C-terminal subdomain (From Topology) | H: Duffy-binding-like domain, C-terminal subdomain (From Topology) | T: Duffy-binding-like domain, C-terminal subdomain | F: F_UNCLASSIFIED | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.10.287.1660 | Mainly Alpha | Orthogonal Bundle | Helix Hairpins | CATH (4.3.0) | |
B | 1.10.287.1660 | Mainly Alpha | Orthogonal Bundle | Helix Hairpins | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF05424 | Duffy binding domain (Duffy_binding) | Duffy binding domain | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
erythrocyte binding antigen region II | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR008602 | Duffy-antigen binding domain | Domain | |
IPR042202 | Duffy-antigen binding superfamily | Homologous Superfamily |