1ZDQ
Crystal Structure of Met150Gly AfNiR with Methylsulfanyl Methane Bound
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d1zdqa1 | All beta proteins | Cupredoxin-like | Cupredoxins | automated matches | automated matches | (Alcaligenes faecalis ) [TaxId: 511 ], | SCOPe (2.08) |
C | d1zdqc1 | All beta proteins | Cupredoxin-like | Cupredoxins | automated matches | automated matches | (Alcaligenes faecalis ) [TaxId: 511 ], | SCOPe (2.08) |
B | d1zdqb1 | All beta proteins | Cupredoxin-like | Cupredoxins | automated matches | automated matches | (Alcaligenes faecalis ) [TaxId: 511 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Cupredoxins | 8039643 | 3000886 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Cupredoxins | 8039642 | 3000886 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Cupredoxins | 8039643 | 3000886 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Cupredoxins | 8039642 | 3000886 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Cupredoxins | 8039643 | 3000886 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Cupredoxins | 8039642 | 3000886 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Cu-oxidase_2_2 | e1zdqA2 | A: beta sandwiches | X: Cupredoxin-like | H: Cupredoxin-related (From Topology) | T: Cupredoxin-related | F: Cu-oxidase_2_2 | ECOD (1.6) |
A | Cu-oxidase_3_1 | e1zdqA1 | A: beta sandwiches | X: Cupredoxin-like | H: Cupredoxin-related (From Topology) | T: Cupredoxin-related | F: Cu-oxidase_3_1 | ECOD (1.6) |
C | Cu-oxidase_2_2 | e1zdqC2 | A: beta sandwiches | X: Cupredoxin-like | H: Cupredoxin-related (From Topology) | T: Cupredoxin-related | F: Cu-oxidase_2_2 | ECOD (1.6) |
C | Cu-oxidase_3_1 | e1zdqC1 | A: beta sandwiches | X: Cupredoxin-like | H: Cupredoxin-related (From Topology) | T: Cupredoxin-related | F: Cu-oxidase_3_1 | ECOD (1.6) |
B | Cu-oxidase_2_2 | e1zdqB2 | A: beta sandwiches | X: Cupredoxin-like | H: Cupredoxin-related (From Topology) | T: Cupredoxin-related | F: Cu-oxidase_2_2 | ECOD (1.6) |
B | Cu-oxidase_3_1 | e1zdqB1 | A: beta sandwiches | X: Cupredoxin-like | H: Cupredoxin-related (From Topology) | T: Cupredoxin-related | F: Cu-oxidase_3_1 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.60.40.420 | Mainly Beta | Sandwich | Immunoglobulin-like | Cupredoxins - blue copper proteins | CATH (4.3.0) |
C | 2.60.40.420 | Mainly Beta | Sandwich | Immunoglobulin-like | Cupredoxins - blue copper proteins | CATH (4.3.0) |
B | 2.60.40.420 | Mainly Beta | Sandwich | Immunoglobulin-like | Cupredoxins - blue copper proteins | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00394 | Multicopper oxidase (Cu-oxidase) | Multicopper oxidase | Many of the proteins in this family contain multiple similar copies of this plastocyanin-like domain. | Domain | |
PF07732 | Multicopper oxidase (Cu-oxidase_3) | Multicopper oxidase | This entry contains many divergent copper oxidase-like domains that are not recognised by the Pfam:PF00394 model. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
Copper-containing nitrite reductase |
|
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR006311 | Twin-arginine translocation pathway, signal sequence | Conserved Site | |
IPR008972 | Cupredoxin | Homologous Superfamily | |
IPR001117 | Multicopper oxidase, second cupredoxin domain | Domain | |
IPR001287 | Nitrite reductase, copper-type | Family | |
IPR011707 | Multicopper oxidase-like, N-terminal | Domain |