1ZBB
Structure of the 4_601_167 Tetranucleosome
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
C [auth A] | d1zbba1 | All alpha proteins | Histone-fold | Histone-fold | Nucleosome core histones | Histone H3 | African clawed frog (Xenopus laevis ) [TaxId: 8355 ], | SCOPe (2.08) |
G [auth E] | d1zbbe1 | All alpha proteins | Histone-fold | Histone-fold | Nucleosome core histones | Histone H3 | African clawed frog (Xenopus laevis ) [TaxId: 8355 ], | SCOPe (2.08) |
D [auth B] | d1zbbb1 | All alpha proteins | Histone-fold | Histone-fold | Nucleosome core histones | Histone H4 | African clawed frog (Xenopus laevis ) [TaxId: 8355 ], | SCOPe (2.08) |
H [auth F] | d1zbbf1 | All alpha proteins | Histone-fold | Histone-fold | Nucleosome core histones | Histone H4 | African clawed frog (Xenopus laevis ) [TaxId: 8355 ], | SCOPe (2.08) |
F [auth D] | d1zbbd1 | All alpha proteins | Histone-fold | Histone-fold | Nucleosome core histones | Histone H2B | African clawed frog (Xenopus laevis ) [TaxId: 8355 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
C [auth A] | SCOP2B Superfamily | Core histone-like | 8041272 | 3001387 | SCOP2B (2022-06-29) |
G [auth E] | SCOP2B Superfamily | Core histone-like | 8041272 | 3001387 | SCOP2B (2022-06-29) |
K [auth a] | SCOP2B Superfamily | Core histone-like | 8041272 | 3001387 | SCOP2B (2022-06-29) |
O [auth e] | SCOP2B Superfamily | Core histone-like | 8041272 | 3001387 | SCOP2B (2022-06-29) |
D [auth B] | SCOP2B Superfamily | Core histone-like | 8042439 | 3001387 | SCOP2B (2022-06-29) |
H [auth F] | SCOP2B Superfamily | Core histone-like | 8042439 | 3001387 | SCOP2B (2022-06-29) |
L [auth b] | SCOP2B Superfamily | Core histone-like | 8042439 | 3001387 | SCOP2B (2022-06-29) |
P [auth f] | SCOP2B Superfamily | Core histone-like | 8042439 | 3001387 | SCOP2B (2022-06-29) |
E [auth C] | SCOP2B Superfamily | Core histone-like | 8041278 | 3001387 | SCOP2B (2022-06-29) |
I [auth G] | SCOP2B Superfamily | Core histone-like | 8041278 | 3001387 | SCOP2B (2022-06-29) |
M [auth c] | SCOP2B Superfamily | Core histone-like | 8041278 | 3001387 | SCOP2B (2022-06-29) |
Q [auth g] | SCOP2B Superfamily | Core histone-like | 8041278 | 3001387 | SCOP2B (2022-06-29) |
F [auth D] | SCOP2B Superfamily | Core histone-like | 8041279 | 3001387 | SCOP2B (2022-06-29) |
J [auth H] | SCOP2B Superfamily | Core histone-like | 8041279 | 3001387 | SCOP2B (2022-06-29) |
N [auth d] | SCOP2B Superfamily | Core histone-like | 8041279 | 3001387 | SCOP2B (2022-06-29) |
R [auth h] | SCOP2B Superfamily | Core histone-like | 8041279 | 3001387 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
C [auth A] | Histone | e1zbbA1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: Histone | ECOD (1.6) |
G [auth E] | Histone | e1zbbE1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: Histone | ECOD (1.6) |
K [auth a] | Histone | e1zbba1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: Histone | ECOD (1.6) |
O [auth e] | Histone | e1zbbe1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: Histone | ECOD (1.6) |
D [auth B] | Histone_1 | e1zbbB1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: Histone_1 | ECOD (1.6) |
H [auth F] | Histone_1 | e1zbbF1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: Histone_1 | ECOD (1.6) |
L [auth b] | Histone_1 | e1zbbb1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: Histone_1 | ECOD (1.6) |
P [auth f] | Histone_1 | e1zbbf1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: Histone_1 | ECOD (1.6) |
E [auth C] | Histone_1 | e1zbbC1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: Histone_1 | ECOD (1.6) |
I [auth G] | Histone_1 | e1zbbG1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: Histone_1 | ECOD (1.6) |
M [auth c] | Histone_1 | e1zbbc1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: Histone_1 | ECOD (1.6) |
Q [auth g] | Histone_1 | e1zbbg1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: Histone_1 | ECOD (1.6) |
F [auth D] | Histone | e1zbbD1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: Histone | ECOD (1.6) |
J [auth H] | Histone | e1zbbH1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: Histone | ECOD (1.6) |
N [auth d] | Histone | e1zbbd2 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: Histone | ECOD (1.6) |
R [auth h] | Histone | e1zbbh1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: Histone | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
D [auth B], H [auth F], L [auth b], P [auth f] | PF15511 | Centromere kinetochore component CENP-T histone fold (CENP-T_C) | Centromere kinetochore component CENP-T histone fold | CENP-T is a family of vertebral kinetochore proteins that associates directly with CENP-W. The N-terminus of CENP-T proteins interacts directly with the Ndc80 complex in the outer kinetochore. Importantly, the CENP-T-W complex does not directly asso ... | Domain |
E [auth C], I [auth G], M [auth c], Q [auth g] | PF16211 | C-terminus of histone H2A (Histone_H2A_C) | C-terminus of histone H2A | - | Family |