1Z1G
Crystal structure of a lambda integrase tetramer bound to a Holliday junction
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
I [auth A] | SCOP2B Superfamily | lambda integrase clamp domain-like | 8091468 | 3000550 | SCOP2B (2021-05-27) |
I [auth A] | SCOP2B Superfamily | DNA breaking-rejoining enzymes | 8036952 | 3001127 | SCOP2B (2021-05-27) |
I [auth A] | SCOP2B Superfamily | DNA-binding domain | 8035081 | 3000183 | SCOP2B (2021-05-27) |
J [auth B] | SCOP2B Superfamily | DNA-binding domain | 8035081 | 3000183 | SCOP2B (2021-05-27) |
J [auth B] | SCOP2B Superfamily | DNA breaking-rejoining enzymes | 8036952 | 3001127 | SCOP2B (2021-05-27) |
J [auth B] | SCOP2B Superfamily | lambda integrase clamp domain-like | 8091468 | 3000550 | SCOP2B (2021-05-27) |
K [auth C] | SCOP2B Superfamily | DNA breaking-rejoining enzymes | 8036952 | 3001127 | SCOP2B (2021-05-27) |
K [auth C] | SCOP2B Superfamily | DNA-binding domain | 8035081 | 3000183 | SCOP2B (2021-05-27) |
K [auth C] | SCOP2B Superfamily | lambda integrase clamp domain-like | 8091468 | 3000550 | SCOP2B (2021-05-27) |
L [auth D] | SCOP2B Superfamily | DNA breaking-rejoining enzymes | 8036952 | 3001127 | SCOP2B (2021-05-27) |
L [auth D] | SCOP2B Superfamily | DNA-binding domain | 8035081 | 3000183 | SCOP2B (2021-05-27) |
L [auth D] | SCOP2B Superfamily | lambda integrase clamp domain-like | 8091468 | 3000550 | SCOP2B (2021-05-27) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
I [auth A] | PF00589 | e1z1gA7 | A: alpha arrays | X: HTH | H: HTH | T: DNA breaking-rejoining enzymes | F: PF00589 | ECOD (1.6) |
I [auth A] | PF02899 | e1z1gA6 | A: alpha arrays | X: lambda integrase-N-like | H: lambda integrase-N (From Topology) | T: lambda integrase-N | F: PF02899 | ECOD (1.6) |
I [auth A] | PF09003 | e1z1gA8 | A: a+b two layers | X: DNA-binding domain | H: GCC-box binding domain-like (From Topology) | T: GCC-box binding domain-like | F: PF09003 | ECOD (1.6) |
J [auth B] | PF00589 | e1z1gB5 | A: alpha arrays | X: HTH | H: HTH | T: DNA breaking-rejoining enzymes | F: PF00589 | ECOD (1.6) |
J [auth B] | PF02899 | e1z1gB6 | A: alpha arrays | X: lambda integrase-N-like | H: lambda integrase-N (From Topology) | T: lambda integrase-N | F: PF02899 | ECOD (1.6) |
J [auth B] | PF09003 | e1z1gB8 | A: a+b two layers | X: DNA-binding domain | H: GCC-box binding domain-like (From Topology) | T: GCC-box binding domain-like | F: PF09003 | ECOD (1.6) |
K [auth C] | PF00589 | e1z1gC7 | A: alpha arrays | X: HTH | H: HTH | T: DNA breaking-rejoining enzymes | F: PF00589 | ECOD (1.6) |
K [auth C] | PF02899 | e1z1gC6 | A: alpha arrays | X: lambda integrase-N-like | H: lambda integrase-N (From Topology) | T: lambda integrase-N | F: PF02899 | ECOD (1.6) |
K [auth C] | PF09003 | e1z1gC8 | A: a+b two layers | X: DNA-binding domain | H: GCC-box binding domain-like (From Topology) | T: GCC-box binding domain-like | F: PF09003 | ECOD (1.6) |
L [auth D] | PF00589 | e1z1gD5 | A: alpha arrays | X: HTH | H: HTH | T: DNA breaking-rejoining enzymes | F: PF00589 | ECOD (1.6) |
L [auth D] | PF02899 | e1z1gD6 | A: alpha arrays | X: lambda integrase-N-like | H: lambda integrase-N (From Topology) | T: lambda integrase-N | F: PF02899 | ECOD (1.6) |
L [auth D] | PF09003 | e1z1gD8 | A: a+b two layers | X: DNA-binding domain | H: GCC-box binding domain-like (From Topology) | T: GCC-box binding domain-like | F: PF09003 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
I [auth A], J [auth B], K [auth C], L [auth D] | PF00589 | Phage integrase family (Phage_integrase) | Phage integrase family | - | Family |
I [auth A], J [auth B], K [auth C], L [auth D] | PF02899 | Phage integrase, N-terminal SAM-like domain (Phage_int_SAM_1) | Phage integrase, N-terminal SAM-like domain | - | Domain |