1Z0G
Crystal Structure of A. fulgidus Lon proteolytic domain
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Ribosomal protein S5 domain 2-like | 8075403 | 3000100 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Ribosomal protein S5 domain 2-like | 8075403 | 3000100 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Ribosomal protein S5 domain 2-like | 8075403 | 3000100 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Ribosomal protein S5 domain 2-like | 8075403 | 3000100 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | Ribosomal protein S5 domain 2-like | 8075403 | 3000100 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | Ribosomal protein S5 domain 2-like | 8075403 | 3000100 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Lon_C_N | e1z0gA3 | A: a+b two layers | X: Ribosomal protein S5 domain 2-like (From Topology) | H: Ribosomal protein S5 domain 2-like (From Topology) | T: Ribosomal protein S5 domain 2-like | F: Lon_C_N | ECOD (1.6) |
A | Lon_C_C | e1z0gA2 | A: a/b three-layered sandwiches | X: C-terminal subdomain in Lon-related proteases catalytic domains (From Topology) | H: C-terminal subdomain in Lon-related proteases catalytic domains (From Topology) | T: C-terminal subdomain in Lon-related proteases catalytic domains | F: Lon_C_C | ECOD (1.6) |
B | Lon_C_N | e1z0gB3 | A: a+b two layers | X: Ribosomal protein S5 domain 2-like (From Topology) | H: Ribosomal protein S5 domain 2-like (From Topology) | T: Ribosomal protein S5 domain 2-like | F: Lon_C_N | ECOD (1.6) |
B | Lon_C_C | e1z0gB2 | A: a/b three-layered sandwiches | X: C-terminal subdomain in Lon-related proteases catalytic domains (From Topology) | H: C-terminal subdomain in Lon-related proteases catalytic domains (From Topology) | T: C-terminal subdomain in Lon-related proteases catalytic domains | F: Lon_C_C | ECOD (1.6) |
C | Lon_C_N | e1z0gC3 | A: a+b two layers | X: Ribosomal protein S5 domain 2-like (From Topology) | H: Ribosomal protein S5 domain 2-like (From Topology) | T: Ribosomal protein S5 domain 2-like | F: Lon_C_N | ECOD (1.6) |
C | Lon_C_C | e1z0gC2 | A: a/b three-layered sandwiches | X: C-terminal subdomain in Lon-related proteases catalytic domains (From Topology) | H: C-terminal subdomain in Lon-related proteases catalytic domains (From Topology) | T: C-terminal subdomain in Lon-related proteases catalytic domains | F: Lon_C_C | ECOD (1.6) |
D | Lon_C_N | e1z0gD3 | A: a+b two layers | X: Ribosomal protein S5 domain 2-like (From Topology) | H: Ribosomal protein S5 domain 2-like (From Topology) | T: Ribosomal protein S5 domain 2-like | F: Lon_C_N | ECOD (1.6) |
D | Lon_C_C | e1z0gD2 | A: a/b three-layered sandwiches | X: C-terminal subdomain in Lon-related proteases catalytic domains (From Topology) | H: C-terminal subdomain in Lon-related proteases catalytic domains (From Topology) | T: C-terminal subdomain in Lon-related proteases catalytic domains | F: Lon_C_C | ECOD (1.6) |
E | Lon_C_N | e1z0gE3 | A: a+b two layers | X: Ribosomal protein S5 domain 2-like (From Topology) | H: Ribosomal protein S5 domain 2-like (From Topology) | T: Ribosomal protein S5 domain 2-like | F: Lon_C_N | ECOD (1.6) |
E | Lon_C_C | e1z0gE2 | A: a/b three-layered sandwiches | X: C-terminal subdomain in Lon-related proteases catalytic domains (From Topology) | H: C-terminal subdomain in Lon-related proteases catalytic domains (From Topology) | T: C-terminal subdomain in Lon-related proteases catalytic domains | F: Lon_C_C | ECOD (1.6) |
F | Lon_C_N | e1z0gF3 | A: a+b two layers | X: Ribosomal protein S5 domain 2-like (From Topology) | H: Ribosomal protein S5 domain 2-like (From Topology) | T: Ribosomal protein S5 domain 2-like | F: Lon_C_N | ECOD (1.6) |
F | Lon_C_C | e1z0gF2 | A: a/b three-layered sandwiches | X: C-terminal subdomain in Lon-related proteases catalytic domains (From Topology) | H: C-terminal subdomain in Lon-related proteases catalytic domains (From Topology) | T: C-terminal subdomain in Lon-related proteases catalytic domains | F: Lon_C_C | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.30.230.10 | Alpha Beta | 2-Layer Sandwich | Ribosomal Protein S5 | domain 2 | CATH (4.3.0) |
B | 3.30.230.10 | Alpha Beta | 2-Layer Sandwich | Ribosomal Protein S5 | domain 2 | CATH (4.3.0) |
C | 3.30.230.10 | Alpha Beta | 2-Layer Sandwich | Ribosomal Protein S5 | domain 2 | CATH (4.3.0) |
D | 3.30.230.10 | Alpha Beta | 2-Layer Sandwich | Ribosomal Protein S5 | domain 2 | CATH (4.3.0) |
E | 3.30.230.10 | Alpha Beta | 2-Layer Sandwich | Ribosomal Protein S5 | domain 2 | CATH (4.3.0) |
F | 3.30.230.10 | Alpha Beta | 2-Layer Sandwich | Ribosomal Protein S5 | domain 2 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF05362 | Lon protease (S16) C-terminal proteolytic domain (Lon_C) | Lon protease (S16) C-terminal proteolytic domain | The Lon serine proteases must hydrolyse ATP to degrade protein substrates. In Escherichia coli, these proteases are involved in turnover of intracellular proteins, including abnormal proteins following heat-shock. The active site for protease activit ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR002078 | RNA polymerase sigma factor 54 interaction domain | Domain | |
IPR000523 | Magnesium chelatase ChlI-like, catalytic domain | Domain | |
IPR004663 | Lon protease, archaeal | Family | |
IPR003593 | AAA+ ATPase domain | Domain | |
IPR008269 | Peptidase S16, Lon proteolytic domain | Domain | |
IPR027065 | Lon protease | Family | |
IPR020568 | Ribosomal protein uS5 domain 2-type superfamily | Homologous Superfamily | |
IPR046843 | LonB, AAA+ ATPase LID domain, archaeal-type | Domain | |
IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily | |
IPR014721 | Small ribosomal subunit protein uS5 domain 2-type fold, subgroup | Homologous Superfamily |