Annotations: 1YTL

Crystal Structure of Acetyl-CoA decarboxylase/synthase complex epsilon subunit 2

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
D	d1ytld_	Alpha and beta proteins (a/b)	DHS-like NAD/FAD-binding domain	DHS-like NAD/FAD-binding domain	ACDE2-like	Acetyl-CoA decarbonylase/synthase complex epsilon subunit 2, ACDE2	(Archaeoglobus fulgidus ) [TaxId: 2234 ],	SCOPe (2.08)
C	d1ytlc_	Alpha and beta proteins (a/b)	DHS-like NAD/FAD-binding domain	DHS-like NAD/FAD-binding domain	ACDE2-like	Acetyl-CoA decarbonylase/synthase complex epsilon subunit 2, ACDE2	(Archaeoglobus fulgidus ) [TaxId: 2234 ],	SCOPe (2.08)
B	d1ytlb_	Alpha and beta proteins (a/b)	DHS-like NAD/FAD-binding domain	DHS-like NAD/FAD-binding domain	ACDE2-like	Acetyl-CoA decarbonylase/synthase complex epsilon subunit 2, ACDE2	(Archaeoglobus fulgidus ) [TaxId: 2234 ],	SCOPe (2.08)
A	d1ytla1	Alpha and beta proteins (a/b)	DHS-like NAD/FAD-binding domain	DHS-like NAD/FAD-binding domain	ACDE2-like	Acetyl-CoA decarbonylase/synthase complex epsilon subunit 2, ACDE2	(Archaeoglobus fulgidus ) [TaxId: 2234 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
D	SCOP2B Superfamily	DHS-like NAD/FAD-binding domain	8034867	3001728	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	DHS-like NAD/FAD-binding domain	8034867	3001728	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	DHS-like NAD/FAD-binding domain	8034867	3001728	SCOP2B (2022-06-29)
A	SCOP2 Family	ACDE2-like	8022487	4002610	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	DHS-like NAD/FAD-binding domain	8034867	3001728	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
D	Methyltransf_2	e1ytlD1	A: beta barrels	X: HTH	H: HTH	T: winged helix domain	F: Methyltransf_2	ECOD (v294.2)
C	Methyltransf_2	e1ytlC1	A: beta barrels	X: HTH	H: HTH	T: winged helix domain	F: Methyltransf_2	ECOD (v294.2)
B	Methyltransf_2	e1ytlB1	A: beta barrels	X: HTH	H: HTH	T: winged helix domain	F: Methyltransf_2	ECOD (v294.2)
A	CO_dh	e1ytlA1	A: beta barrels	X: Rossmann-like	H: Rossmann-related	T: DHS-like NAD/FAD-binding domain	F: CO_dh	ECOD (v294.2)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
D	3.40.50.1220	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	TPP-binding domain	CATH (4.3.0)
C	3.40.50.1220	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	TPP-binding domain	CATH (4.3.0)
B	3.40.50.1220	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	TPP-binding domain	CATH (4.3.0)
A	3.40.50.1220	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	TPP-binding domain	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D	Acetyl-CoA decarboxylase/synthase complex epsilon subunit 2	-	cellular respiration oxoacid metabolic process energy derivation by oxidation of organic compounds carboxylic acid metabolic process alkane biosynthetic process acetate metabolic process methane metabolic process organic acid metabolic process generation of precursor metabolites and energy hydrocarbon metabolic process biosynthetic process energy derivation by oxidation of reduced inorganic compounds methanogenesis small molecule metabolic process cellular respiration oxoacid metabolic process energy derivation by oxidation of organic compounds carboxylic acid metabolic process alkane biosynthetic process acetate metabolic process methane metabolic process organic acid metabolic process generation of precursor metabolites and energy hydrocarbon metabolic process biosynthetic process energy derivation by oxidation of reduced inorganic compounds methanogenesis small molecule metabolic process metabolic process cellular process monocarboxylic acid metabolic process hydrocarbon biosynthetic process anaerobic respiration methanogenesis, from acetate	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D	IPR003704	Acetyl-CoA decarbonylase/synthase complex subunit epsilon	Family
A, B, C, D	IPR029035	DHS-like NAD/FAD-binding domain superfamily	Homologous Superfamily

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.