1YKL
Protocatechuate 3,4-Dioxygenase Y408C mutant bound to DHB
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Aromatic compound dioxygenase | 8040371 | 3000868 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Aromatic compound dioxygenase | 8040371 | 3000868 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | Aromatic compound dioxygenase | 8040371 | 3000868 | SCOP2B (2022-06-29) |
G | SCOP2B Superfamily | Aromatic compound dioxygenase | 8040371 | 3000868 | SCOP2B (2022-06-29) |
K | SCOP2B Superfamily | Aromatic compound dioxygenase | 8040371 | 3000868 | SCOP2B (2022-06-29) |
I | SCOP2B Superfamily | Aromatic compound dioxygenase | 8040371 | 3000868 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Aromatic compound dioxygenase | 8032517 | 3000868 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Aromatic compound dioxygenase | 8032517 | 3000868 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | Aromatic compound dioxygenase | 8032517 | 3000868 | SCOP2B (2022-06-29) |
H | SCOP2B Superfamily | Aromatic compound dioxygenase | 8032517 | 3000868 | SCOP2B (2022-06-29) |
J | SCOP2B Superfamily | Aromatic compound dioxygenase | 8032517 | 3000868 | SCOP2B (2022-06-29) |
L | SCOP2B Superfamily | Aromatic compound dioxygenase | 8032517 | 3000868 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF00775 | e1yklA1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Prealbumin-like | F: PF00775 | ECOD (1.6) |
C | PF00775 | e1yklC1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Prealbumin-like | F: PF00775 | ECOD (1.6) |
E | PF00775 | e1yklE1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Prealbumin-like | F: PF00775 | ECOD (1.6) |
G | PF00775 | e1yklG1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Prealbumin-like | F: PF00775 | ECOD (1.6) |
K | PF00775 | e1yklK1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Prealbumin-like | F: PF00775 | ECOD (1.6) |
I | PF00775 | e1yklI1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Prealbumin-like | F: PF00775 | ECOD (1.6) |
B | PF00775,PF12391 | e1yklB1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Prealbumin-like | F: PF00775,PF12391 | ECOD (1.6) |
D | PF00775,PF12391 | e1yklD1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Prealbumin-like | F: PF00775,PF12391 | ECOD (1.6) |
F | PF00775,PF12391 | e1yklF1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Prealbumin-like | F: PF00775,PF12391 | ECOD (1.6) |
H | PF00775,PF12391 | e1yklH1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Prealbumin-like | F: PF00775,PF12391 | ECOD (1.6) |
J | PF00775,PF12391 | e1yklJ1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Prealbumin-like | F: PF00775,PF12391 | ECOD (1.6) |
L | PF00775,PF12391 | e1yklL1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Prealbumin-like | F: PF00775,PF12391 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00775 | Dioxygenase (Dioxygenase_C) | Dioxygenase | - | Domain | |
PF12391 | Protocatechuate 3,4-dioxygenase beta subunit N terminal (PCDO_beta_N) | Protocatechuate 3,4-dioxygenase beta subunit N terminal | - | Family | |
PF00775 | Dioxygenase (Dioxygenase_C) | Dioxygenase | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR012786 | Protocatechuate 3,4-dioxygenase, alpha subunit | Family | |
IPR000627 | Intradiol ring-cleavage dioxygenase, C-terminal | Domain | |
IPR015889 | Intradiol ring-cleavage dioxygenase, core | Homologous Superfamily | |
IPR012785 | Protocatechuate 3,4-dioxygenase, beta subunit | Family | |
IPR000627 | Intradiol ring-cleavage dioxygenase, C-terminal | Domain | |
IPR024756 | Protocatechuate 3,4-dioxygenase beta subunit, N-terminal | Domain | |
IPR015889 | Intradiol ring-cleavage dioxygenase, core | Homologous Superfamily |