Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Dd1ya7d_ Alpha and beta proteins (a+b) Ntn hydrolase-like N-terminal nucleophile aminohydrolases (Ntn hydrolases) Proteasome subunits automated matches (Thermoplasma acidophilum ) [TaxId: 2303 ], SCOPe (2.08)
Ad1ya7a_ Alpha and beta proteins (a+b) Ntn hydrolase-like N-terminal nucleophile aminohydrolases (Ntn hydrolases) Proteasome subunits automated matches (Thermoplasma acidophilum ) [TaxId: 2303 ], SCOPe (2.08)
Bd1ya7b_ Alpha and beta proteins (a+b) Ntn hydrolase-like N-terminal nucleophile aminohydrolases (Ntn hydrolases) Proteasome subunits automated matches (Thermoplasma acidophilum ) [TaxId: 2303 ], SCOPe (2.08)
Cd1ya7c_ Alpha and beta proteins (a+b) Ntn hydrolase-like N-terminal nucleophile aminohydrolases (Ntn hydrolases) Proteasome subunits automated matches (Thermoplasma acidophilum ) [TaxId: 2303 ], SCOPe (2.08)
Ed1ya7e_ Alpha and beta proteins (a+b) Ntn hydrolase-like N-terminal nucleophile aminohydrolases (Ntn hydrolases) Proteasome subunits automated matches (Thermoplasma acidophilum ) [TaxId: 2303 ], SCOPe (2.08)
Fd1ya7f_ Alpha and beta proteins (a+b) Ntn hydrolase-like N-terminal nucleophile aminohydrolases (Ntn hydrolases) Proteasome subunits automated matches (Thermoplasma acidophilum ) [TaxId: 2303 ], SCOPe (2.08)
Gd1ya7g_ Alpha and beta proteins (a+b) Ntn hydrolase-like N-terminal nucleophile aminohydrolases (Ntn hydrolases) Proteasome subunits automated matches (Thermoplasma acidophilum ) [TaxId: 2303 ], SCOPe (2.08)
Od1ya7o1 All alpha proteins Four-helical up-and-down bundle Proteasome activator Proteasome activator Proteasome activator protein PA26 (Trypanosoma brucei ) [TaxId: 5691 ], SCOPe (2.08)
Pd1ya7p_ All alpha proteins Four-helical up-and-down bundle Proteasome activator Proteasome activator automated matches (Trypanosoma brucei ) [TaxId: 5691 ], SCOPe (2.08)
Qd1ya7q_ All alpha proteins Four-helical up-and-down bundle Proteasome activator Proteasome activator automated matches (Trypanosoma brucei ) [TaxId: 5691 ], SCOPe (2.08)
Rd1ya7r_ All alpha proteins Four-helical up-and-down bundle Proteasome activator Proteasome activator automated matches (Trypanosoma brucei ) [TaxId: 5691 ], SCOPe (2.08)
Sd1ya7s_ All alpha proteins Four-helical up-and-down bundle Proteasome activator Proteasome activator automated matches (Trypanosoma brucei ) [TaxId: 5691 ], SCOPe (2.08)
Td1ya7t_ All alpha proteins Four-helical up-and-down bundle Proteasome activator Proteasome activator automated matches (Trypanosoma brucei ) [TaxId: 5691 ], SCOPe (2.08)
Ud1ya7u_ All alpha proteins Four-helical up-and-down bundle Proteasome activator Proteasome activator automated matches (Trypanosoma brucei ) [TaxId: 5691 ], SCOPe (2.08)
Id1ya7i_ Alpha and beta proteins (a+b) Ntn hydrolase-like N-terminal nucleophile aminohydrolases (Ntn hydrolases) Proteasome subunits automated matches (Thermoplasma acidophilum ) [TaxId: 2303 ], SCOPe (2.08)
Hd1ya7h_ Alpha and beta proteins (a+b) Ntn hydrolase-like N-terminal nucleophile aminohydrolases (Ntn hydrolases) Proteasome subunits automated matches (Thermoplasma acidophilum ) [TaxId: 2303 ], SCOPe (2.08)
Jd1ya7j_ Alpha and beta proteins (a+b) Ntn hydrolase-like N-terminal nucleophile aminohydrolases (Ntn hydrolases) Proteasome subunits automated matches (Thermoplasma acidophilum ) [TaxId: 2303 ], SCOPe (2.08)
Kd1ya7k_ Alpha and beta proteins (a+b) Ntn hydrolase-like N-terminal nucleophile aminohydrolases (Ntn hydrolases) Proteasome subunits automated matches (Thermoplasma acidophilum ) [TaxId: 2303 ], SCOPe (2.08)
Ld1ya7l_ Alpha and beta proteins (a+b) Ntn hydrolase-like N-terminal nucleophile aminohydrolases (Ntn hydrolases) Proteasome subunits automated matches (Thermoplasma acidophilum ) [TaxId: 2303 ], SCOPe (2.08)
Md1ya7m_ Alpha and beta proteins (a+b) Ntn hydrolase-like N-terminal nucleophile aminohydrolases (Ntn hydrolases) Proteasome subunits automated matches (Thermoplasma acidophilum ) [TaxId: 2303 ], SCOPe (2.08)
Nd1ya7n_ Alpha and beta proteins (a+b) Ntn hydrolase-like N-terminal nucleophile aminohydrolases (Ntn hydrolases) Proteasome subunits automated matches (Thermoplasma acidophilum ) [TaxId: 2303 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
DSCOP2B SuperfamilyClass II glutamine amidotransferases 8034248 3000131 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyClass II glutamine amidotransferases 8034248 3000131 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyClass II glutamine amidotransferases 8034248 3000131 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyClass II glutamine amidotransferases 8034248 3000131 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyClass II glutamine amidotransferases 8034248 3000131 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyClass II glutamine amidotransferases 8034248 3000131 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyClass II glutamine amidotransferases 8034248 3000131 SCOP2B (2022-06-29)
OSCOP2B SuperfamilyProteasome activator-like 8032475 3001611 SCOP2B (2022-06-29)
PSCOP2B SuperfamilyProteasome activator-like 8032475 3001611 SCOP2B (2022-06-29)
QSCOP2B SuperfamilyProteasome activator-like 8032475 3001611 SCOP2B (2022-06-29)
RSCOP2B SuperfamilyProteasome activator-like 8032475 3001611 SCOP2B (2022-06-29)
SSCOP2B SuperfamilyProteasome activator-like 8032475 3001611 SCOP2B (2022-06-29)
TSCOP2B SuperfamilyProteasome activator-like 8032475 3001611 SCOP2B (2022-06-29)
USCOP2B SuperfamilyProteasome activator-like 8032475 3001611 SCOP2B (2022-06-29)
ISCOP2B SuperfamilyClass II glutamine amidotransferases 8034254 3000131 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyClass II glutamine amidotransferases 8034254 3000131 SCOP2B (2022-06-29)
JSCOP2B SuperfamilyClass II glutamine amidotransferases 8034254 3000131 SCOP2B (2022-06-29)
KSCOP2B SuperfamilyClass II glutamine amidotransferases 8034254 3000131 SCOP2B (2022-06-29)
LSCOP2B SuperfamilyClass II glutamine amidotransferases 8034254 3000131 SCOP2B (2022-06-29)
MSCOP2B SuperfamilyClass II glutamine amidotransferases 8034254 3000131 SCOP2B (2022-06-29)
NSCOP2B SuperfamilyClass II glutamine amidotransferases 8034254 3000131 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
DProteasomee1ya7D1 A: a+b four layersX: Ntn/PP2CH: NtnT: Proteasome subunitsF: ProteasomeECOD (1.6)
AProteasomee1ya7A1 A: a+b four layersX: Ntn/PP2CH: NtnT: Proteasome subunitsF: ProteasomeECOD (1.6)
BProteasomee1ya7B1 A: a+b four layersX: Ntn/PP2CH: NtnT: Proteasome subunitsF: ProteasomeECOD (1.6)
CProteasomee1ya7C1 A: a+b four layersX: Ntn/PP2CH: NtnT: Proteasome subunitsF: ProteasomeECOD (1.6)
EProteasomee1ya7E1 A: a+b four layersX: Ntn/PP2CH: NtnT: Proteasome subunitsF: ProteasomeECOD (1.6)
FProteasomee1ya7F1 A: a+b four layersX: Ntn/PP2CH: NtnT: Proteasome subunitsF: ProteasomeECOD (1.6)
GProteasomee1ya7G1 A: a+b four layersX: Ntn/PP2CH: NtnT: Proteasome subunitsF: ProteasomeECOD (1.6)
OPA28_beta_1e1ya7O1 A: alpha bundlesX: Four-helical up-and-down bundleH: Proteasome activator reg(alpha) (From Topology)T: Proteasome activator reg(alpha)F: PA28_beta_1ECOD (1.6)
PPA28_beta_1e1ya7P1 A: alpha bundlesX: Four-helical up-and-down bundleH: Proteasome activator reg(alpha) (From Topology)T: Proteasome activator reg(alpha)F: PA28_beta_1ECOD (1.6)
QPA28_beta_1e1ya7Q1 A: alpha bundlesX: Four-helical up-and-down bundleH: Proteasome activator reg(alpha) (From Topology)T: Proteasome activator reg(alpha)F: PA28_beta_1ECOD (1.6)
RPA28_beta_1e1ya7R1 A: alpha bundlesX: Four-helical up-and-down bundleH: Proteasome activator reg(alpha) (From Topology)T: Proteasome activator reg(alpha)F: PA28_beta_1ECOD (1.6)
SPA28_beta_1e1ya7S1 A: alpha bundlesX: Four-helical up-and-down bundleH: Proteasome activator reg(alpha) (From Topology)T: Proteasome activator reg(alpha)F: PA28_beta_1ECOD (1.6)
TPA28_beta_1e1ya7T1 A: alpha bundlesX: Four-helical up-and-down bundleH: Proteasome activator reg(alpha) (From Topology)T: Proteasome activator reg(alpha)F: PA28_beta_1ECOD (1.6)
UPA28_beta_1e1ya7U1 A: alpha bundlesX: Four-helical up-and-down bundleH: Proteasome activator reg(alpha) (From Topology)T: Proteasome activator reg(alpha)F: PA28_beta_1ECOD (1.6)
IProteasomee1ya7I1 A: a+b four layersX: Ntn/PP2CH: NtnT: Proteasome subunitsF: ProteasomeECOD (1.6)
HProteasomee1ya7H1 A: a+b four layersX: Ntn/PP2CH: NtnT: Proteasome subunitsF: ProteasomeECOD (1.6)
JProteasomee1ya7J1 A: a+b four layersX: Ntn/PP2CH: NtnT: Proteasome subunitsF: ProteasomeECOD (1.6)
KProteasomee1ya7K1 A: a+b four layersX: Ntn/PP2CH: NtnT: Proteasome subunitsF: ProteasomeECOD (1.6)
LProteasomee1ya7L1 A: a+b four layersX: Ntn/PP2CH: NtnT: Proteasome subunitsF: ProteasomeECOD (1.6)
MProteasomee1ya7M1 A: a+b four layersX: Ntn/PP2CH: NtnT: Proteasome subunitsF: ProteasomeECOD (1.6)
NProteasomee1ya7N1 A: a+b four layersX: Ntn/PP2CH: NtnT: Proteasome subunitsF: ProteasomeECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
D3.60.20.10 Alpha Beta 4-Layer Sandwich Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 Aminohydrolase, N-terminal nucleophile (Ntn) domainCATH (4.3.0)
A3.60.20.10 Alpha Beta 4-Layer Sandwich Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 Aminohydrolase, N-terminal nucleophile (Ntn) domainCATH (4.3.0)
B3.60.20.10 Alpha Beta 4-Layer Sandwich Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 Aminohydrolase, N-terminal nucleophile (Ntn) domainCATH (4.3.0)
C3.60.20.10 Alpha Beta 4-Layer Sandwich Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 Aminohydrolase, N-terminal nucleophile (Ntn) domainCATH (4.3.0)
E3.60.20.10 Alpha Beta 4-Layer Sandwich Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 Aminohydrolase, N-terminal nucleophile (Ntn) domainCATH (4.3.0)
F3.60.20.10 Alpha Beta 4-Layer Sandwich Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 Aminohydrolase, N-terminal nucleophile (Ntn) domainCATH (4.3.0)
G3.60.20.10 Alpha Beta 4-Layer Sandwich Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 Aminohydrolase, N-terminal nucleophile (Ntn) domainCATH (4.3.0)
O1.20.120.180 Mainly Alpha Up-down Bundle Four Helix Bundle (Hemerythrin (Met), subunit A) Proteasome activator pa28, C-terminal domainCATH (4.3.0)
P1.20.120.180 Mainly Alpha Up-down Bundle Four Helix Bundle (Hemerythrin (Met), subunit A) Proteasome activator pa28, C-terminal domainCATH (4.3.0)
Q1.20.120.180 Mainly Alpha Up-down Bundle Four Helix Bundle (Hemerythrin (Met), subunit A) Proteasome activator pa28, C-terminal domainCATH (4.3.0)
R1.20.120.180 Mainly Alpha Up-down Bundle Four Helix Bundle (Hemerythrin (Met), subunit A) Proteasome activator pa28, C-terminal domainCATH (4.3.0)
S1.20.120.180 Mainly Alpha Up-down Bundle Four Helix Bundle (Hemerythrin (Met), subunit A) Proteasome activator pa28, C-terminal domainCATH (4.3.0)
T1.20.120.180 Mainly Alpha Up-down Bundle Four Helix Bundle (Hemerythrin (Met), subunit A) Proteasome activator pa28, C-terminal domainCATH (4.3.0)
U1.20.120.180 Mainly Alpha Up-down Bundle Four Helix Bundle (Hemerythrin (Met), subunit A) Proteasome activator pa28, C-terminal domainCATH (4.3.0)
I3.60.20.10 Alpha Beta 4-Layer Sandwich Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 Aminohydrolase, N-terminal nucleophile (Ntn) domainCATH (4.3.0)
H3.60.20.10 Alpha Beta 4-Layer Sandwich Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 Aminohydrolase, N-terminal nucleophile (Ntn) domainCATH (4.3.0)
J3.60.20.10 Alpha Beta 4-Layer Sandwich Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 Aminohydrolase, N-terminal nucleophile (Ntn) domainCATH (4.3.0)
K3.60.20.10 Alpha Beta 4-Layer Sandwich Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 Aminohydrolase, N-terminal nucleophile (Ntn) domainCATH (4.3.0)
L3.60.20.10 Alpha Beta 4-Layer Sandwich Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 Aminohydrolase, N-terminal nucleophile (Ntn) domainCATH (4.3.0)
M3.60.20.10 Alpha Beta 4-Layer Sandwich Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 Aminohydrolase, N-terminal nucleophile (Ntn) domainCATH (4.3.0)
N3.60.20.10 Alpha Beta 4-Layer Sandwich Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 Aminohydrolase, N-terminal nucleophile (Ntn) domainCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D, E
PF00227Proteasome subunit (Proteasome)Proteasome subunitThe proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ...The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity: from HslV (heat shock locus v), which is encoded by 1 gene in bacteria, to the eukaryotic 20S proteasome, which is encoded by more than 14 genes [1]. Recently evidence of two novel groups of bacterial proteasomes was proposed. The first is Anbu, which is sparsely distributed among cyanobacteria and proteobacteria [1]. The second is call beta-proteobacteria proteasome homologue (BPH) [1].
Domain
A, B, C, D, E
PF10584Proteasome subunit A N-terminal signature (Proteasome_A_N)Proteasome subunit A N-terminal signature- Family
O, P, Q, R, S
PF02252Proteasome activator PA28, C-terminal (PA28_C)Proteasome activator PA28, C-terminalProteasome activator 28 (PA28), also known as 11s regulator of REG, binds to the 20S proteasome and simulates peptidase activity in an ATP-independent manner. This entry represents a the C-terminal domain found in PA28 subunits, including PA28alpha/b ...Proteasome activator 28 (PA28), also known as 11s regulator of REG, binds to the 20S proteasome and simulates peptidase activity in an ATP-independent manner. This entry represents a the C-terminal domain found in PA28 subunits, including PA28alpha/beta/gamma (also known as Proteasome activator complex subunit 1-3) [1-4].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D, E
Proteasome alpha subunit
O, P, Q, R, S
proteasome activator protein PA26-
H, I, J, K, L
Proteasome beta subunit

InterPro: Protein Family Classification InterPro Database Homepage