1Y2X | pdb_00001y2x

Crystal structure of the tetragonal form of the common edible mushroom (Agaricus bisporus) lectin in complex with T-antigen and N-acetylglucosamine

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Bd1y2xb_ All beta proteins Cytolysin/lectin Cytolysin/lectin Fungal fruit body lectin TF antigen-binding lectin (Agaricus bisporus ) [TaxId: 5341 ], SCOPe (2.08)
Cd1y2xc_ All beta proteins Cytolysin/lectin Cytolysin/lectin Fungal fruit body lectin TF antigen-binding lectin (Agaricus bisporus ) [TaxId: 5341 ], SCOPe (2.08)
Dd1y2xd_ All beta proteins Cytolysin/lectin Cytolysin/lectin Fungal fruit body lectin TF antigen-binding lectin (Agaricus bisporus ) [TaxId: 5341 ], SCOPe (2.08)
Ad1y2xa_ All beta proteins Cytolysin/lectin Cytolysin/lectin Fungal fruit body lectin TF antigen-binding lectin (Agaricus bisporus ) [TaxId: 5341 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
BSCOP2B SuperfamilyCytolysin/lectin 8044274 3000379 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyCytolysin/lectin 8044274 3000379 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyCytolysin/lectin 8044274 3000379 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyCytolysin/lectin 8044274 3000379 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BAlpha-L-AF_Ce1y2xB1 A: beta barrelsX: Phage tail fiber protein trimerization domainH: beta-Prism IT: beta-Prism IF: Alpha-L-AF_CECOD (v294.2)
CAlpha-L-AF_Ce1y2xC1 A: beta barrelsX: Phage tail fiber protein trimerization domainH: beta-Prism IT: beta-Prism IF: Alpha-L-AF_CECOD (v294.2)
DAlpha-L-AF_Ce1y2xD1 A: beta barrelsX: Phage tail fiber protein trimerization domainH: beta-Prism IT: beta-Prism IF: Alpha-L-AF_CECOD (v294.2)
AAlpha-L-AF_Ce1y2xA1 A: beta barrelsX: Phage tail fiber protein trimerization domainH: beta-Prism IT: beta-Prism IF: Alpha-L-AF_CECOD (v294.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B2.60.270.20 Mainly Beta Sandwich Mutm (Fpg) Protein Chain: A, domain 2CATH (4.3.0)
C2.60.270.20 Mainly Beta Sandwich Mutm (Fpg) Protein Chain: A, domain 2CATH (4.3.0)
D2.60.270.20 Mainly Beta Sandwich Mutm (Fpg) Protein Chain: A, domain 2CATH (4.3.0)
A2.60.270.20 Mainly Beta Sandwich Mutm (Fpg) Protein Chain: A, domain 2CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D
lectin - -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D
IPR015926Cytolysin/lectinHomologous Superfamily
A, B, C, D
IPR009960Fungal fruit body lectinFamily