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Porcine Factor IXa Complexed to 1-{3-[amino(imino)methyl]phenyl}-N-[4-(1H-benzimidazol-1-yl)-2-fluorophenyl]-3-(trifluoromethyl)-1H-pyrazole-5-carboxamide External Resource: Annotation Chains Type Family Name Domain Identifier Family Identifier Provenance Source (Version) A [auth C] SCOP2B Superfamily Trypsin-like serine proteases 8042261 3000114 SCOP2B (2022-06-29)
Chains Family Name Domain Identifier Architecture Possible Homology Homology Topology Family Provenance Source (Version) A [auth C] Trypsin_1 e1x7aC1 A: beta barrels X: cradle loop barrel H: RIFT-related T: FMN-binding split barrel 2 F: Trypsin_1 ECOD (1.6) B [auth L] FXa_inhibition e1x7aL2 A: few secondary structure elements X: EGF-like H: EGF-related T: EGF/Laminin F: FXa_inhibition ECOD (1.6) B [auth L] hEGF e1x7aL1 A: few secondary structure elements X: EGF-like H: EGF-related T: EGF/Laminin F: hEGF ECOD (1.6)
Chains Accession Name Description Comments Source A [auth C] PF00089 Trypsin (Trypsin) Trypsin - Domain B [auth L] PF00008 EGF-like domain (EGF) EGF-like domain There is no clear separation between noise and signal. Pfam:PF00053 is very similar, but has 8 instead of 6 conserved cysteines. Includes some cytokine receptors. The EGF domain misses the N-terminus regions of the Ca2+ binding EGF domains (this is t ... There is no clear separation between noise and signal. Pfam:PF00053 is very similar, but has 8 instead of 6 conserved cysteines. Includes some cytokine receptors. The EGF domain misses the N-terminus regions of the Ca2+ binding EGF domains (this is the main reason of discrepancy between swiss-prot domain start/end and Pfam). The family is hard to model due to many similar but different sub-types of EGF domains. Pfam certainly misses a number of EGF domains. Less Domain B [auth L] PF14670 Coagulation Factor Xa inhibitory site (FXa_inhibition) Coagulation Factor Xa inhibitory site This short domain on coagulation enzyme factor Xa is found to be the target for a potent inhibitor of coagulation, TAK-442 [1]. Domain
Chains Polymer Molecular Function Biological Process Cellular Component A [auth C] Coagulation Factor IXa B [auth L] Coagulation Factor IX, light chain
Chains Accession Name Type A [auth C] IPR050442 Peptidase S1 family, coagulation factors Family A [auth C] IPR009003 Peptidase S1, PA clan Homologous Superfamily A [auth C] IPR000294 Gamma-carboxyglutamic acid-rich (GLA) domain Domain A [auth C] IPR017857 Coagulation factor-like, Gla domain superfamily Homologous Superfamily A [auth C] IPR018097 EGF-like calcium-binding, conserved site Conserved Site A [auth C] IPR001314 Peptidase S1A, chymotrypsin family Family A [auth C] IPR033116 Serine proteases, trypsin family, serine active site Active Site A [auth C] IPR001254 Serine proteases, trypsin domain Domain A [auth C] IPR035972 Gamma-carboxyglutamic acid-rich (GLA) domain superfamily Homologous Superfamily A [auth C] IPR001881 EGF-like calcium-binding domain Domain A [auth C] IPR000742 EGF-like domain Domain A [auth C] IPR043504 Peptidase S1, PA clan, chymotrypsin-like fold Homologous Superfamily A [auth C] IPR000152 EGF-type aspartate/asparagine hydroxylation site PTM A [auth C] IPR018114 Serine proteases, trypsin family, histidine active site Active Site A [auth C] IPR012224 Peptidase S1A, coagulation factor VII/IX/X/C/Z Family B [auth L] IPR050442 Peptidase S1 family, coagulation factors Family B [auth L] IPR009003 Peptidase S1, PA clan Homologous Superfamily B [auth L] IPR000294 Gamma-carboxyglutamic acid-rich (GLA) domain Domain B [auth L] IPR017857 Coagulation factor-like, Gla domain superfamily Homologous Superfamily B [auth L] IPR018097 EGF-like calcium-binding, conserved site Conserved Site B [auth L] IPR001314 Peptidase S1A, chymotrypsin family Family B [auth L] IPR033116 Serine proteases, trypsin family, serine active site Active Site B [auth L] IPR001254 Serine proteases, trypsin domain Domain B [auth L] IPR035972 Gamma-carboxyglutamic acid-rich (GLA) domain superfamily Homologous Superfamily B [auth L] IPR001881 EGF-like calcium-binding domain Domain B [auth L] IPR000742 EGF-like domain Domain B [auth L] IPR043504 Peptidase S1, PA clan, chymotrypsin-like fold Homologous Superfamily B [auth L] IPR000152 EGF-type aspartate/asparagine hydroxylation site PTM B [auth L] IPR018114 Serine proteases, trypsin family, histidine active site Active Site B [auth L] IPR012224 Peptidase S1A, coagulation factor VII/IX/X/C/Z Family