Annotations: 1VMJ

CRYSTAL STRUCTURE OF A PUTATIVE THIAMIN PHOSPHATE SYNTHASE (TM0723) FROM THERMOTOGA MARITIMA MSB8 AT 1.52 A RESOLUTION

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d1vmja_	Alpha and beta proteins (a+b)	YjbQ-like	YjbQ-like	YjbQ-like	Hypothetical protein TM0723	(Thermotoga maritima MSB8 ) [TaxId: 243274 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	YjbQ-like	8030710	4002602	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	YjbQ-like	8043089	3001472	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	UPF0047	e1vmjA1	A: a+b two layers	X: YjbQ-like (Pfam 01894)	H: YjbQ-like (Pfam 01894)	T: YjbQ-like (Pfam 01894)	F: UPF0047	ECOD (v294.2)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	2.60.120.460	Mainly Beta	Sandwich	Jelly Rolls	YjbQ-like	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF01894	UPF0047 protein YjbQ-like (YjbQ)	UPF0047 protein YjbQ-like	This family includes YjbQ from Escherichia coli, its orthologue from Pyrococcus furiosus and similar sequences. These proteins have been shown to have sufficient thiamine phosphate synthase activity to complement thiE mutants. However, it is presumed ...	This family includes YjbQ from Escherichia coli, its orthologue from Pyrococcus furiosus and similar sequences. These proteins have been shown to have sufficient thiamine phosphate synthase activity to complement thiE mutants. However, it is presumed that this is a secondary activity, and the primary function of the YjbQ family enzyme remains unknown [1, 2].	Domain

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR035917	YjbQ-like superfamily	Homologous Superfamily
A	IPR001602	UPF0047 protein YjbQ-like	Family

RCSB PDB is hosted by

RCSB PDB is a member of

RCSB Partners
Nucleic Acid Knowledgebase

CoreTrustSeal

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.