1VI7
Crystal structure of an hypothetical protein
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d1vi7a1 | Alpha and beta proteins (a+b) | Ribosomal protein S5 domain 2-like | Ribosomal protein S5 domain 2-like | YigZ N-terminal domain-like | Hypothetical protein YigZ, N-terminal domain | (Escherichia coli ) [TaxId: 562 ], | SCOPe (2.08) |
A | d1vi7a2 | Alpha and beta proteins (a+b) | Ferredoxin-like | EF-G C-terminal domain-like | YigZ C-terminal domain-like | Hypothetical protein YigZ, C-terminal domain | (Escherichia coli ) [TaxId: 562 ], | SCOPe (2.08) |
A | d1vi7a4 | Artifacts | Tags | Tags | Tags | C-terminal Tags | (Escherichia coli ) [TaxId: 562 ], | SCOPe (2.08) |
A | d1vi7a3 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Escherichia coli ) [TaxId: 562 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | YigZ N-terminal domain-like | 8023488 | 4001275 | SCOP2 (2022-06-29) |
A | SCOP2 Family | YigZ C-terminal domain-like | 8023489 | 4001473 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Ribosomal protein S5 domain 2-like | 8035868 | 3000100 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | EF-G C-terminal domain-like | 8035869 | 3001287 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | UPF0029 | e1vi7A2 | A: a+b two layers | X: Ribosomal protein S5 domain 2-like (From Topology) | H: Ribosomal protein S5 domain 2-like (From Topology) | T: Ribosomal protein S5 domain 2-like | F: UPF0029 | ECOD (1.6) |
A | DUF1949_1 | e1vi7A1 | A: a+b two layers | X: Alpha-beta plaits | H: EF-G C-terminal domain-like (From Topology) | T: EF-G C-terminal domain-like | F: DUF1949_1 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.30.230.30 | Alpha Beta | 2-Layer Sandwich | Ribosomal Protein S5 | domain 2 | CATH (4.3.0) |
A | 3.30.70.240 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF01205 | Uncharacterized protein family UPF0029 (UPF0029) | Uncharacterized protein family UPF0029 | - | Family | |
PF09186 | Domain of unknown function (DUF1949) (DUF1949) | Domain of unknown function (DUF1949) | Members of this family pertain to a set of functionally uncharacterised hypothetical bacterial proteins. They adopt a ferredoxin-like fold, with a beta-alpha-beta-beta-alpha-beta arrangement [1]. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR015269 | Uncharacterised domain UPF0029, Impact, C-terminal | Domain | |
IPR023582 | Impact family | Family | |
IPR036956 | Impact, N-terminal domain superfamily | Homologous Superfamily | |
IPR020568 | Ribosomal protein uS5 domain 2-type superfamily | Homologous Superfamily | |
IPR035647 | EF-G domain III/V-like | Homologous Superfamily | |
IPR001498 | Impact, N-terminal | Domain | |
IPR020569 | Uncharacterised protein family UPF0029, Impact, conserved site | Conserved Site | |
IPR015796 | Impact YigZ-like | Family |