Annotations: 1V02

Crystal structure of the Sorghum bicolor dhurrinase 1

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
E	d1v02e_	Alpha and beta proteins (a/b)	TIM beta/alpha-barrel	(Trans)glycosidases	Family 1 of glycosyl hydrolase	Plant beta-glucosidase (myrosinase)	SORGHUM (Sorghum bicolor ) [TaxId: 4558 ],	SCOPe (2.08)
F	d1v02f_	Alpha and beta proteins (a/b)	TIM beta/alpha-barrel	(Trans)glycosidases	Family 1 of glycosyl hydrolase	Plant beta-glucosidase (myrosinase)	SORGHUM (Sorghum bicolor ) [TaxId: 4558 ],	SCOPe (2.08)
D	d1v02d_	Alpha and beta proteins (a/b)	TIM beta/alpha-barrel	(Trans)glycosidases	Family 1 of glycosyl hydrolase	Plant beta-glucosidase (myrosinase)	SORGHUM (Sorghum bicolor ) [TaxId: 4558 ],	SCOPe (2.08)
C	d1v02c_	Alpha and beta proteins (a/b)	TIM beta/alpha-barrel	(Trans)glycosidases	Family 1 of glycosyl hydrolase	Plant beta-glucosidase (myrosinase)	SORGHUM (Sorghum bicolor ) [TaxId: 4558 ],	SCOPe (2.08)
B	d1v02b_	Alpha and beta proteins (a/b)	TIM beta/alpha-barrel	(Trans)glycosidases	Family 1 of glycosyl hydrolase	Plant beta-glucosidase (myrosinase)	SORGHUM (Sorghum bicolor ) [TaxId: 4558 ],	SCOPe (2.08)
A	d1v02a_	Alpha and beta proteins (a/b)	TIM beta/alpha-barrel	(Trans)glycosidases	Family 1 of glycosyl hydrolase	Plant beta-glucosidase (myrosinase)	SORGHUM (Sorghum bicolor ) [TaxId: 4558 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
E	SCOP2B Superfamily	(Trans)glycosidases	8041060	3000313	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	(Trans)glycosidases	8041060	3000313	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	(Trans)glycosidases	8041060	3000313	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	(Trans)glycosidases	8041060	3000313	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	(Trans)glycosidases	8041060	3000313	SCOP2B (2022-06-29)
A	SCOP2 Family	Family 1 of glycosyl hydrolase	8028681	4003184	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	(Trans)glycosidases	8041060	3000313	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
E	NAD_binding_3	e1v02E1	A: alpha arrays	X: C-terminal subdomain in Lon-related proteases catalytic domains	H: C-terminal subdomain in Lon-related proteases catalytic domains	T: C-terminal subdomain in Lon-related proteases catalytic domains	F: NAD_binding_3	ECOD (v295.2)
F	NAD_binding_3	e1v02F1	A: alpha arrays	X: C-terminal subdomain in Lon-related proteases catalytic domains	H: C-terminal subdomain in Lon-related proteases catalytic domains	T: C-terminal subdomain in Lon-related proteases catalytic domains	F: NAD_binding_3	ECOD (v295.2)
D	NAD_binding_3	e1v02D1	A: alpha arrays	X: C-terminal subdomain in Lon-related proteases catalytic domains	H: C-terminal subdomain in Lon-related proteases catalytic domains	T: C-terminal subdomain in Lon-related proteases catalytic domains	F: NAD_binding_3	ECOD (v295.2)
C	NAD_binding_3	e1v02C1	A: alpha arrays	X: C-terminal subdomain in Lon-related proteases catalytic domains	H: C-terminal subdomain in Lon-related proteases catalytic domains	T: C-terminal subdomain in Lon-related proteases catalytic domains	F: NAD_binding_3	ECOD (v295.2)
B	NAD_binding_3	e1v02B1	A: alpha arrays	X: C-terminal subdomain in Lon-related proteases catalytic domains	H: C-terminal subdomain in Lon-related proteases catalytic domains	T: C-terminal subdomain in Lon-related proteases catalytic domains	F: NAD_binding_3	ECOD (v295.2)
A	NAD_binding_3	e1v02A1	A: alpha arrays	X: C-terminal subdomain in Lon-related proteases catalytic domains	H: C-terminal subdomain in Lon-related proteases catalytic domains	T: C-terminal subdomain in Lon-related proteases catalytic domains	F: NAD_binding_3	ECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
E	3.20.20.80	Alpha Beta	Alpha-Beta Barrel	TIM Barrel	Glycosidases	CATH (4.3.0)
F	3.20.20.80	Alpha Beta	Alpha-Beta Barrel	TIM Barrel	Glycosidases	CATH (4.3.0)
D	3.20.20.80	Alpha Beta	Alpha-Beta Barrel	TIM Barrel	Glycosidases	CATH (4.3.0)
C	3.20.20.80	Alpha Beta	Alpha-Beta Barrel	TIM Barrel	Glycosidases	CATH (4.3.0)
B	3.20.20.80	Alpha Beta	Alpha-Beta Barrel	TIM Barrel	Glycosidases	CATH (4.3.0)
A	3.20.20.80	Alpha Beta	Alpha-Beta Barrel	TIM Barrel	Glycosidases	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
E	DHURRINASE	hydrolase activity, acting on glycosyl bonds glucosidase activity hydrolase activity, hydrolyzing O-glycosyl compounds hydrolase activity beta-glucosidase activity catalytic activity DIMBOA glucoside beta-D-glucosidase activity	carbohydrate metabolic process primary metabolic process metabolic process cellular process	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure plastid organelle cytoplasm intracellular membrane-bounded organelle chloroplast
A, B, C, D, F	DHURRINASE	hydrolase activity, acting on glycosyl bonds glucosidase activity hydrolase activity, hydrolyzing O-glycosyl compounds hydrolase activity beta-glucosidase activity catalytic activity DIMBOA glucoside beta-D-glucosidase activity	carbohydrate metabolic process primary metabolic process metabolic process cellular process	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure plastid organelle cytoplasm intracellular membrane-bounded organelle chloroplast

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
E	IPR001360	Glycoside hydrolase family 1	Family
E	IPR018120	Glycoside hydrolase family 1, active site	Active Site
E	IPR017853	Glycoside hydrolase superfamily	Homologous Superfamily
E	IPR033132	Glycosyl hydrolases family 1, N-terminal conserved site	Conserved Site
A, B, C, D, F	IPR001360	Glycoside hydrolase family 1	Family
A, B, C, D, F	IPR018120	Glycoside hydrolase family 1, active site	Active Site
A, B, C, D, F	IPR017853	Glycoside hydrolase superfamily	Homologous Superfamily
A, B, C, D, F	IPR033132	Glycosyl hydrolases family 1, N-terminal conserved site	Conserved Site

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