1UWX
P1.2 serosubtype antigen derived from N. meningitidis PorA in complex with Fab fragment
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d1uwxa_ | Alpha and beta proteins (a+b) | beta-Grasp (ubiquitin-like) | Immunoglobulin-binding domains | Immunoglobulin-binding domains | automated matches | (Streptococcus sp. ) [TaxId: 1306 ], | SCOPe (2.08) |
B | d1uwxb_ | Alpha and beta proteins (a+b) | beta-Grasp (ubiquitin-like) | Immunoglobulin-binding domains | Immunoglobulin-binding domains | automated matches | (Streptococcus sp. ) [TaxId: 1306 ], | SCOPe (2.08) |
C [auth H] | d1uwxh1 | All beta proteins | Immunoglobulin-like beta-sandwich | Immunoglobulin | C1 set domains (antibody constant domain-like) | Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma | (Mus musculus ) [TaxId: 10090 ], | SCOPe (2.08) |
F [auth M] | d1uwxm1 | All beta proteins | Immunoglobulin-like beta-sandwich | Immunoglobulin | C1 set domains (antibody constant domain-like) | Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma | (Mus musculus ) [TaxId: 10090 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Immunoglobulin-binding domains-like | 8072912 | 3000399 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Immunoglobulin-binding domains-like | 8072912 | 3000399 | SCOP2B (2022-06-29) |
D [auth K] | SCOP2B Superfamily | Immunoglobulin (Ig) domain-like | 8091539 | 3000071 | SCOP2B (2022-06-29) |
E [auth L] | SCOP2B Superfamily | Immunoglobulin (Ig) domain-like | 8091539 | 3000071 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | IgG_binding_B | e1uwxA1 | A: a+b two layers | X: beta-Grasp | H: Immunoglobulin-binding domains (From Topology) | T: Immunoglobulin-binding domains | F: IgG_binding_B | ECOD (1.6) |
B | IgG_binding_B | e1uwxB1 | A: a+b two layers | X: beta-Grasp | H: Immunoglobulin-binding domains (From Topology) | T: Immunoglobulin-binding domains | F: IgG_binding_B | ECOD (1.6) |
C [auth H] | V-set_8 | e1uwxH2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: V-set_8 | ECOD (1.6) |
C [auth H] | C1-set_1 | e1uwxH1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: C1-set_1 | ECOD (1.6) |
F [auth M] | V-set_8 | e1uwxM2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: V-set_8 | ECOD (1.6) |
F [auth M] | C1-set_1 | e1uwxM1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: C1-set_1 | ECOD (1.6) |
D [auth K] | C1-set_4 | e1uwxK2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: C1-set_4 | ECOD (1.6) |
D [auth K] | V-set | e1uwxK1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: V-set | ECOD (1.6) |
E [auth L] | C1-set_4 | e1uwxL2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: C1-set_4 | ECOD (1.6) |
E [auth L] | V-set | e1uwxL1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: V-set | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.10.20.10 | Alpha Beta | Roll | Ubiquitin-like (UB roll) | CATH (4.3.0) | |
B | 3.10.20.10 | Alpha Beta | Roll | Ubiquitin-like (UB roll) | CATH (4.3.0) | |
C [auth H] | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
F [auth M] | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
D [auth K] | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
E [auth L] | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
IMGT Antibody Annotation IMGT Database Homepage
Chain | Protein Name | Description | Organism Name | Gene Allele Name(s) | Domain Name(s) | Receptor Type | Receptor Description | Provenance Source |
---|---|---|---|---|---|---|---|---|
C [auth H], F [auth M] | P1.2 | VH-CH1 | Mus musculus (house mouse) | IGHV9-3-1*01, IGHJ2*01, IGHG2A*01, IGHG2A*02 | V-DOMAIN VH, C-DOMAIN CH1 | IG | FAB-GAMMA-2A_KAPPA | IMGT (202440-0) |
D [auth K], E [auth L] | P1.2 | L-KAPPA | Mus musculus (house mouse) | IGKV12-98*01, IGKJ2*01, IGKC*01, IGKC*02 | V-DOMAIN V-KAPPA, C-DOMAIN C-KAPPA | IG | FAB-GAMMA-2A_KAPPA | IMGT (202440-0) |
SAbDab Antibody Annotation SAbDab Database Homepage
Chain | Chain Class | Chain Subclass | Chain Type | Antigen Name(s) | Provenance Source |
---|---|---|---|---|---|
C [auth H], F [auth M] | Heavy Chain | IGHV9 | - | class 1 outer membrane protein variable region 2 | SAbDab (2024-10-11) |
D [auth K], E [auth L] | Light Chain | IGKV12 | Kappa | class 1 outer membrane protein variable region 2 | SAbDab (2024-10-11) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
D [auth K], E [auth L] | PF07654 | Immunoglobulin C1-set domain (C1-set) | Immunoglobulin C1-set domain | - | Domain |