1SU6
Carbon monoxide dehydrogenase from Carboxydothermus hydrogenoformans: CO reduced state
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d1su6a_ | Multi-domain proteins (alpha and beta) | Prismane protein-like | Prismane protein-like | Carbon monoxide dehydrogenase | Ni-containing carbon monoxide dehydrogenase | (Carboxydothermus hydrogenoformans ) [TaxId: 129958 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Prismane protein cluster-binding domain-like | 8041678 | 3001926 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Prismane protein cluster-binding domain-like | 8055597 | 3001926 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Prismane protein N-terminal helical bundle-like | 8055598 | 3002294 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Prismane_2nd | e1su6A1 | A: alpha bundles | X: Helical bundle domain in prismane-like proteins (From Topology) | H: Helical bundle domain in prismane-like proteins (From Topology) | T: Helical bundle domain in prismane-like proteins | F: Prismane_2nd | ECOD (1.6) |
A | Prismane_4th | e1su6A4 | A: a/b three-layered sandwiches | X: Rossmann-like domain in prismane-like proteins (From Topology) | H: Rossmann-like domain in prismane-like proteins (From Topology) | T: Rossmann-like domain in prismane-like proteins | F: Prismane_4th | ECOD (1.6) |
A | Prismane_3rd | e1su6A3 | A: a/b three-layered sandwiches | X: Rossmann-like domain in prismane-like proteins (From Topology) | H: Rossmann-like domain in prismane-like proteins (From Topology) | T: Rossmann-like domain in prismane-like proteins | F: Prismane_3rd | ECOD (1.6) |
A | CODH | e1su6A2 | A: few secondary structure elements | X: Fe-binding domain in prismane-like proteins (From Topology) | H: Fe-binding domain in prismane-like proteins (From Topology) | T: Fe-binding domain in prismane-like proteins | F: CODH | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.20.1270.30 | Mainly Alpha | Up-down Bundle | Substrate Binding Domain Of Dnak | Chain:A | CATH (4.3.0) |
A | 3.40.50.2030 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF03063 | Prismane/CO dehydrogenase family (Prismane) | Prismane/CO dehydrogenase family | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR016099 | Prismane-like, alpha/beta-sandwich | Homologous Superfamily | |
IPR004137 | Hydroxylamine reductase/Ni-containing CO dehydrogenase | Family | |
IPR016101 | CO dehydrogenase, alpha-bundle | Homologous Superfamily | |
IPR010047 | Ni-containing CO dehydrogenase | Family | |
IPR011254 | Prismane-like superfamily | Homologous Superfamily |