Crystal structure of the [Fe3S4]-ferredoxin from the hyperthermophilic archaeon Pyrococcus furiosus
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | d1siza_ | Alpha and beta proteins (a+b) | Ferredoxin-like | 4Fe-4S ferredoxins | Single 4Fe-4S cluster ferredoxin | Fe3S4-ferredoxin PF1909 | (Pyrococcus furiosus ) [TaxId: 2261 ], | SCOPe (2.08) |
| B [auth C] | d1sizc_ | Alpha and beta proteins (a+b) | Ferredoxin-like | 4Fe-4S ferredoxins | Single 4Fe-4S cluster ferredoxin | Fe3S4-ferredoxin PF1909 | (Pyrococcus furiosus ) [TaxId: 2261 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | Fer4_13 | e1sizA2 | A: a/b three-layered sandwiches | X: DEATH domain | H: Ten stranded beta/alpha barrel | T: Ten stranded beta/alpha barrel | F: Fer4_13 | ECOD (v294.1) |
| B [auth C] | Fer4_13 | e1sizC2 | A: a/b three-layered sandwiches | X: DEATH domain | H: Ten stranded beta/alpha barrel | T: Ten stranded beta/alpha barrel | F: Fer4_13 | ECOD (v294.1) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| A | 3.30.70.20 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | CATH (4.3.0) | |
| B [auth C] | 3.30.70.20 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| A, B [auth C] | PF13370 | 4Fe-4S single cluster domain of Ferredoxin I (Fer4_13) | 4Fe-4S single cluster domain of Ferredoxin I | Fer4_13 is a ferredoxin I from sulfate-reducing bacteria. Chemical sequence analysis suggests that this characteristic [4Fe-4S] cluster sulfur environment is widely distributed among ferredoxins [1]. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| A, B [auth C] | Ferredoxin | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| A, B [auth C] | IPR017896 | 4Fe-4S ferredoxin-type, iron-sulphur binding domain | Domain |
| A, B [auth C] | IPR001080 | 3Fe-4S ferredoxin | Family |
| A, B [auth C] | IPR051269 | Iron-sulfur cluster electron transport | Family |














