1S4Z
HP1 chromo shadow domain in complex with PXVXL motif of CAF-1
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d1s4za1 | All beta proteins | SH3-like barrel | Chromo domain-like | Chromo domain | Heterochromatin protein 1, HP1 | house mouse (Mus musculus ) [TaxId: 10090 ], | SCOPe (2.08) |
A | d1s4za2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | house mouse (Mus musculus ) [TaxId: 10090 ], | SCOPe (2.08) |
B | d1s4zb1 | All beta proteins | SH3-like barrel | Chromo domain-like | Chromo domain | Heterochromatin protein 1, HP1 | house mouse (Mus musculus ) [TaxId: 10090 ], | SCOPe (2.08) |
B | d1s4zb2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | house mouse (Mus musculus ) [TaxId: 10090 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Chromo_shadow | e1s4zA1 | A: beta barrels | X: SH3 | H: Chromo domain-like (From Topology) | T: Chromo domain-like | F: Chromo_shadow | ECOD (1.6) |
B | Chromo_shadow | e1s4zB1 | A: beta barrels | X: SH3 | H: Chromo domain-like (From Topology) | T: Chromo domain-like | F: Chromo_shadow | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.40.50.40 | Mainly Beta | Beta Barrel | OB fold (Dihydrolipoamide Acetyltransferase, E2P) | CATH (4.3.0) | |
B | 2.40.50.40 | Mainly Beta | Beta Barrel | OB fold (Dihydrolipoamide Acetyltransferase, E2P) | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF01393 | Chromo shadow domain (Chromo_shadow) | Chromo shadow domain | This domain is distantly related to Pfam:PF00385. This domain is always found in association with a chromo domain. | Domain | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR000953 | Chromo/chromo shadow domain | Domain | |
IPR023780 | Chromo domain | Domain | |
IPR016197 | Chromo-like domain superfamily | Homologous Superfamily | |
IPR023779 | Chromo domain, conserved site | Conserved Site | |
IPR008251 | Chromo shadow domain | Domain | |
IPR051219 | Heterochromatin-associated chromo domain-containing protein | Family | |
IPR017984 | Chromo domain subgroup | Domain | |
IPR029091 | Chromatin assembly factor 1 subunit p150, N-terminal | Domain | |
IPR029105 | Chromatin assembly factor 1 subunit p150, C-terminal | Domain | |
IPR022043 | Chromatin assembly factor 1 subunit A, dimerization domain | Domain |