1S2D
Purine 2'-Deoxyribosyl complex with arabinoside: Ribosylated Intermediate (AraA)
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | d1s2db_ | Alpha and beta proteins (a/b) | Flavodoxin-like | N-(deoxy)ribosyltransferase-like | N-deoxyribosyltransferase | Purine transdeoxyribosylase | (Lactobacillus helveticus ) [TaxId: 1587 ], | SCOPe (2.08) |
C | d1s2dc_ | Alpha and beta proteins (a/b) | Flavodoxin-like | N-(deoxy)ribosyltransferase-like | N-deoxyribosyltransferase | Purine transdeoxyribosylase | (Lactobacillus helveticus ) [TaxId: 1587 ], | SCOPe (2.08) |
A | d1s2da_ | Alpha and beta proteins (a/b) | Flavodoxin-like | N-(deoxy)ribosyltransferase-like | N-deoxyribosyltransferase | Purine transdeoxyribosylase | (Lactobacillus helveticus ) [TaxId: 1587 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
B | SCOP2 Family | N-deoxyribosyltransferase | 8028870 | 4003738 | SCOP2 (2022-06-29) |
B | SCOP2 Superfamily | N-(deoxy)ribosyltransferase-like | 8041249 | 3001392 | SCOP2 (2022-06-29) |
C | SCOP2B Superfamily | N-(deoxy)ribosyltransferase-like | 8041249 | 3001392 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | N-(deoxy)ribosyltransferase-like | 8041249 | 3001392 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | PF05014 | e1s2dB1 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: N-deoxyribosyltransferase (From Topology) | T: N-deoxyribosyltransferase | F: PF05014 | ECOD (1.6) |
C | PF05014 | e1s2dC1 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: N-deoxyribosyltransferase (From Topology) | T: N-deoxyribosyltransferase | F: PF05014 | ECOD (1.6) |
A | PF05014 | e1s2dA1 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: N-deoxyribosyltransferase (From Topology) | T: N-deoxyribosyltransferase | F: PF05014 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
B | 3.40.50.450 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | CATH (4.3.0) | |
C | 3.40.50.450 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | CATH (4.3.0) | |
A | 3.40.50.450 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF05014 | Nucleoside 2-deoxyribosyltransferase (Nuc_deoxyrib_tr) | Nucleoside 2-deoxyribosyltransferase | Nucleoside 2-deoxyribosyltransferase EC:2.4.2.6 catalyses the cleavage of the glycosidic bonds of 2`-deoxyribonucleosides [1]. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
Nucleoside 2-deoxyribosyltransferase | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR007710 | Nucleoside 2-deoxyribosyltransferase | Family |