1RQV
Spatial model of L7 dimer from E.coli with one hinge region in helical state
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Ribosomal protein L7/12, oligomerisation (N-terminal) domain | 8042101 | 3001092 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Ribosomal protein L7/12, oligomerisation (N-terminal) domain | 8042101 | 3001092 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF16320 | e1rqvA3 | A: alpha duplicates or obligate multimers | X: Ribosomal protein L7/12, oligomerisation (N-terminal) domain (From Topology) | H: Ribosomal protein L7/12, oligomerisation (N-terminal) domain (From Topology) | T: Ribosomal protein L7/12, oligomerisation (N-terminal) domain | F: PF16320 | ECOD (1.6) |
A | PF00542 | e1rqvA2 | A: a+b two layers | X: ClpS-like | H: ClpS-related (From Topology) | T: ClpS-related | F: PF00542 | ECOD (1.6) |
B | PF16320 | e1rqvB1 | A: alpha duplicates or obligate multimers | X: Ribosomal protein L7/12, oligomerisation (N-terminal) domain (From Topology) | H: Ribosomal protein L7/12, oligomerisation (N-terminal) domain (From Topology) | T: Ribosomal protein L7/12, oligomerisation (N-terminal) domain | F: PF16320 | ECOD (1.6) |
B | PF00542 | e1rqvB2 | A: a+b two layers | X: ClpS-like | H: ClpS-related (From Topology) | T: ClpS-related | F: PF00542 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.20.5.710 | Mainly Alpha | Up-down Bundle | Single alpha-helices involved in coiled-coils or other helix-helix interfaces | Single helix bin | CATH (4.3.0) |
A | 3.30.1390.10 | Alpha Beta | 2-Layer Sandwich | Ribosomal Protein L30 | Chain: A, | CATH (4.3.0) |
B | 1.20.5.710 | Mainly Alpha | Up-down Bundle | Single alpha-helices involved in coiled-coils or other helix-helix interfaces | Single helix bin | CATH (4.3.0) |
B | 3.30.1390.10 | Alpha Beta | 2-Layer Sandwich | Ribosomal Protein L30 | Chain: A, | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF16320 | Ribosomal protein L7/L12 dimerisation domain (Ribosomal_L12_N) | Ribosomal protein L7/L12 dimerisation domain | This is the N-terminal dimerisation domain of ribosomal protein L7/L12 [1]. | Domain | |
PF00542 | Ribosomal protein L7/L12 C-terminal domain (Ribosomal_L12) | Ribosomal protein L7/L12 C-terminal domain | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR013823 | Large ribosomal subunit protein bL12, C-terminal | Domain | |
IPR008932 | Large ribosomal subunit protein bL12, oligomerization | Domain | |
IPR036235 | Large ribosomal subunit protein bL12, oligomerization domain superfamily | Homologous Superfamily | |
IPR014719 | Ribosomal protein bL12, C-terminal/adaptor protein ClpS-like | Homologous Superfamily | |
IPR000206 | Large ribosomal subunit protein bL12 | Family |