1QOJ
Crystal Structure of E.coli UvrB C-terminal domain, and a model for UvrB-UvrC interaction.
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d1qoja_ | All alpha proteins | Long alpha-hairpin | C-terminal UvrC-binding domain of UvrB | C-terminal UvrC-binding domain of UvrB | C-terminal UvrC-binding domain of UvrB | (Escherichia coli ) [TaxId: 562 ], | SCOPe (2.08) |
B | d1qojb_ | All alpha proteins | Long alpha-hairpin | C-terminal UvrC-binding domain of UvrB | C-terminal UvrC-binding domain of UvrB | C-terminal UvrC-binding domain of UvrB | (Escherichia coli ) [TaxId: 562 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | C-terminal UvrC-binding domain of UvrB | 8023944 | 4000619 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | C-terminal UvrC-binding domain of UvrB | 8036323 | 3000775 | SCOP2 (2022-06-29) |
B | SCOP2B Superfamily | C-terminal UvrC-binding domain of UvrB | 8036323 | 3000775 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | UVR | e1qojA1 | A: alpha bundles | X: Long alpha-hairpin | H: C-terminal UvrC-binding domain of UvrB (From Topology) | T: C-terminal UvrC-binding domain of UvrB | F: UVR | ECOD (1.6) |
B | UVR | e1qojB1 | A: alpha bundles | X: Long alpha-hairpin | H: C-terminal UvrC-binding domain of UvrB (From Topology) | T: C-terminal UvrC-binding domain of UvrB | F: UVR | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 4.10.860.10 | Few Secondary Structures | Irregular | DNA Excision Repair, Uvrb | Chain A | CATH (4.3.0) |
B | 4.10.860.10 | Few Secondary Structures | Irregular | DNA Excision Repair, Uvrb | Chain A | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF02151 | UvrB/uvrC motif (UVR) | UvrB/uvrC motif | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR024759 | UvrB, YAD/RRR-motif-containing domain | Domain | |
IPR006935 | Helicase/UvrB, N-terminal | Domain | |
IPR041471 | UvrB, interaction domain | Domain | |
IPR001650 | Helicase, C-terminal domain-like | Domain | |
IPR036876 | UVR domain superfamily | Homologous Superfamily | |
IPR014001 | Helicase superfamily 1/2, ATP-binding domain | Domain | |
IPR001943 | UVR domain | Domain | |
IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily | |
IPR004807 | UvrABC system, subunit B | Family |