1Q4Q

Crystal structure of a DIAP1-Dronc complex

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d1q4qa_	Small proteins	Inhibitor of apoptosis (IAP) repeat	Inhibitor of apoptosis (IAP) repeat	Inhibitor of apoptosis (IAP) repeat	BIR domains of DIAP1	fruit fly (Drosophila melanogaster ) [TaxId: 7227 ],	SCOPe (2.08)
C	d1q4qc_	Small proteins	Inhibitor of apoptosis (IAP) repeat	Inhibitor of apoptosis (IAP) repeat	Inhibitor of apoptosis (IAP) repeat	BIR domains of DIAP1	fruit fly (Drosophila melanogaster ) [TaxId: 7227 ],	SCOPe (2.08)
D	d1q4qd_	Small proteins	Inhibitor of apoptosis (IAP) repeat	Inhibitor of apoptosis (IAP) repeat	Inhibitor of apoptosis (IAP) repeat	BIR domains of DIAP1	fruit fly (Drosophila melanogaster ) [TaxId: 7227 ],	SCOPe (2.08)
E	d1q4qe_	Small proteins	Inhibitor of apoptosis (IAP) repeat	Inhibitor of apoptosis (IAP) repeat	Inhibitor of apoptosis (IAP) repeat	BIR domains of DIAP1	fruit fly (Drosophila melanogaster ) [TaxId: 7227 ],	SCOPe (2.08)
I	d1q4qi_	Small proteins	Inhibitor of apoptosis (IAP) repeat	Inhibitor of apoptosis (IAP) repeat	Inhibitor of apoptosis (IAP) repeat	BIR domains of DIAP1	fruit fly (Drosophila melanogaster ) [TaxId: 7227 ],	SCOPe (2.08)
B	d1q4qb_	Small proteins	Inhibitor of apoptosis (IAP) repeat	Inhibitor of apoptosis (IAP) repeat	Inhibitor of apoptosis (IAP) repeat	BIR domains of DIAP1	fruit fly (Drosophila melanogaster ) [TaxId: 7227 ],	SCOPe (2.08)
F	d1q4qf_	Small proteins	Inhibitor of apoptosis (IAP) repeat	Inhibitor of apoptosis (IAP) repeat	Inhibitor of apoptosis (IAP) repeat	BIR domains of DIAP1	fruit fly (Drosophila melanogaster ) [TaxId: 7227 ],	SCOPe (2.08)
G	d1q4qg_	Small proteins	Inhibitor of apoptosis (IAP) repeat	Inhibitor of apoptosis (IAP) repeat	Inhibitor of apoptosis (IAP) repeat	BIR domains of DIAP1	fruit fly (Drosophila melanogaster ) [TaxId: 7227 ],	SCOPe (2.08)
H	d1q4qh_	Small proteins	Inhibitor of apoptosis (IAP) repeat	Inhibitor of apoptosis (IAP) repeat	Inhibitor of apoptosis (IAP) repeat	BIR domains of DIAP1	fruit fly (Drosophila melanogaster ) [TaxId: 7227 ],	SCOPe (2.08)
J	d1q4qj_	Small proteins	Inhibitor of apoptosis (IAP) repeat	Inhibitor of apoptosis (IAP) repeat	Inhibitor of apoptosis (IAP) repeat	BIR domains of DIAP1	fruit fly (Drosophila melanogaster ) [TaxId: 7227 ],	SCOPe (2.08)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	BIR	e1q4qA1	A: few secondary structure elements	X: Inhibitor of apoptosis (IAP) repeat (From Topology)	H: Inhibitor of apoptosis (IAP) repeat (From Topology)	T: Inhibitor of apoptosis (IAP) repeat	F: BIR	ECOD (1.6)
C	BIR	e1q4qC1	A: few secondary structure elements	X: Inhibitor of apoptosis (IAP) repeat (From Topology)	H: Inhibitor of apoptosis (IAP) repeat (From Topology)	T: Inhibitor of apoptosis (IAP) repeat	F: BIR	ECOD (1.6)
D	BIR	e1q4qD1	A: few secondary structure elements	X: Inhibitor of apoptosis (IAP) repeat (From Topology)	H: Inhibitor of apoptosis (IAP) repeat (From Topology)	T: Inhibitor of apoptosis (IAP) repeat	F: BIR	ECOD (1.6)
E	BIR	e1q4qE1	A: few secondary structure elements	X: Inhibitor of apoptosis (IAP) repeat (From Topology)	H: Inhibitor of apoptosis (IAP) repeat (From Topology)	T: Inhibitor of apoptosis (IAP) repeat	F: BIR	ECOD (1.6)
I	BIR	e1q4qI1	A: few secondary structure elements	X: Inhibitor of apoptosis (IAP) repeat (From Topology)	H: Inhibitor of apoptosis (IAP) repeat (From Topology)	T: Inhibitor of apoptosis (IAP) repeat	F: BIR	ECOD (1.6)
B	BIR	e1q4qB1	A: few secondary structure elements	X: Inhibitor of apoptosis (IAP) repeat (From Topology)	H: Inhibitor of apoptosis (IAP) repeat (From Topology)	T: Inhibitor of apoptosis (IAP) repeat	F: BIR	ECOD (1.6)
F	BIR	e1q4qF1	A: few secondary structure elements	X: Inhibitor of apoptosis (IAP) repeat (From Topology)	H: Inhibitor of apoptosis (IAP) repeat (From Topology)	T: Inhibitor of apoptosis (IAP) repeat	F: BIR	ECOD (1.6)
G	BIR	e1q4qG1	A: few secondary structure elements	X: Inhibitor of apoptosis (IAP) repeat (From Topology)	H: Inhibitor of apoptosis (IAP) repeat (From Topology)	T: Inhibitor of apoptosis (IAP) repeat	F: BIR	ECOD (1.6)
H	BIR	e1q4qH1	A: few secondary structure elements	X: Inhibitor of apoptosis (IAP) repeat (From Topology)	H: Inhibitor of apoptosis (IAP) repeat (From Topology)	T: Inhibitor of apoptosis (IAP) repeat	F: BIR	ECOD (1.6)
J	BIR	e1q4qJ1	A: few secondary structure elements	X: Inhibitor of apoptosis (IAP) repeat (From Topology)	H: Inhibitor of apoptosis (IAP) repeat (From Topology)	T: Inhibitor of apoptosis (IAP) repeat	F: BIR	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	1.10.1170.10	Mainly Alpha	Orthogonal Bundle	Inhibitor Of Apoptosis Protein (2mihbC-IAP-1)	Chain A	CATH (4.3.0)
C	1.10.1170.10	Mainly Alpha	Orthogonal Bundle	Inhibitor Of Apoptosis Protein (2mihbC-IAP-1)	Chain A	CATH (4.3.0)
D	1.10.1170.10	Mainly Alpha	Orthogonal Bundle	Inhibitor Of Apoptosis Protein (2mihbC-IAP-1)	Chain A	CATH (4.3.0)
E	1.10.1170.10	Mainly Alpha	Orthogonal Bundle	Inhibitor Of Apoptosis Protein (2mihbC-IAP-1)	Chain A	CATH (4.3.0)
I	1.10.1170.10	Mainly Alpha	Orthogonal Bundle	Inhibitor Of Apoptosis Protein (2mihbC-IAP-1)	Chain A	CATH (4.3.0)
B	1.10.1170.10	Mainly Alpha	Orthogonal Bundle	Inhibitor Of Apoptosis Protein (2mihbC-IAP-1)	Chain A	CATH (4.3.0)
F	1.10.1170.10	Mainly Alpha	Orthogonal Bundle	Inhibitor Of Apoptosis Protein (2mihbC-IAP-1)	Chain A	CATH (4.3.0)
G	1.10.1170.10	Mainly Alpha	Orthogonal Bundle	Inhibitor Of Apoptosis Protein (2mihbC-IAP-1)	Chain A	CATH (4.3.0)
H	1.10.1170.10	Mainly Alpha	Orthogonal Bundle	Inhibitor Of Apoptosis Protein (2mihbC-IAP-1)	Chain A	CATH (4.3.0)
J	1.10.1170.10	Mainly Alpha	Orthogonal Bundle	Inhibitor Of Apoptosis Protein (2mihbC-IAP-1)	Chain A	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E A, B, C, D, E, F, G, H, I, J	PF00653	Inhibitor of Apoptosis domain (BIR)	Inhibitor of Apoptosis domain	BIR stands for 'Baculovirus Inhibitor of apoptosis protein Repeat'. It is found repeated in inhibitor of apoptosis proteins (IAPs), and in fact it is also known as IAP repeat. These domains characteristically have a number of invariant residues, incl ...	BIR stands for 'Baculovirus Inhibitor of apoptosis protein Repeat'. It is found repeated in inhibitor of apoptosis proteins (IAPs), and in fact it is also known as IAP repeat. These domains characteristically have a number of invariant residues, including 3 conserved cysteines and one conserved histidine that coordinate a zinc ion. They are usually made up of 4-5 alpha helices and a three-stranded beta-sheet. BIR is also found in other proteins known as BIR-domain-containing proteins (BIRPs), such as Survivin (Swiss:O15392) [2].	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F, G, H, I, J	Apoptosis 1 inhibitor	enzyme regulator activity molecular function inhibitor activity peptidase regulator activity molecular function regulator activity enzyme inhibitor activity cysteine-type endopeptidase inhibitor activity peptidase inhibitor activity endopeptidase regulator activity endopeptidase inhibitor activity aminoacyltransferase activity ubiquitin-like protein transferase activity catalytic activity, acting on a protein acyltransferase activity ubiquitin-like protein ligase activity enzyme regulator activity molecular function inhibitor activity peptidase regulator activity molecular function regulator activity enzyme inhibitor activity cysteine-type endopeptidase inhibitor activity peptidase inhibitor activity endopeptidase regulator activity endopeptidase inhibitor activity aminoacyltransferase activity ubiquitin-like protein transferase activity catalytic activity, acting on a protein acyltransferase activity ubiquitin-like protein ligase activity ubiquitin protein ligase activity transferase activity catalytic activity ubiquitin-protein transferase activity ubiquitin-like protein conjugating enzyme binding protein binding binding enzyme binding cysteine-type endopeptidase inhibitor activity involved in apoptotic process cysteine-type endopeptidase regulator activity involved in apoptotic process ubiquitin-specific protease binding protease binding ubiquitin conjugating enzyme binding caspase binding NEDD8 transferase activity NEDD8 ligase activity ubiquitin protein ligase binding ubiquitin-like protein ligase binding cation binding transition metal ion binding zinc ion binding ion binding metal ion binding small molecule binding	developmental process spermatogenesis sexual reproduction reproductive process multicellular organismal reproductive process developmental process involved in reproduction male gamete generation gamete generation spermatid development spermatid differentiation cellular developmental process cell development cellular process involved in reproduction in multicellular organism cellular component organization developmental process spermatogenesis sexual reproduction reproductive process multicellular organismal reproductive process developmental process involved in reproduction male gamete generation gamete generation spermatid development spermatid differentiation cellular developmental process cell development cellular process involved in reproduction in multicellular organism cellular component organization nucleus organization organelle organization cell differentiation anatomical structure development germ cell development cellular process cellular component organization or biogenesis spermatid nucleus differentiation regulation of biological process regulation of cellular process negative regulation of programmed cell death regulation of apoptotic process biological regulation negative regulation of biological process regulation of programmed cell death cell death negative regulation of apoptotic process negative regulation of cellular process apoptotic process programmed cell death compound eye retinal cell programmed cell death multicellular organismal process regulation of developmental process sensory organ development visual system development eye morphogenesis multicellular organism development compound eye morphogenesis regulation of retinal cell programmed cell death negative regulation of compound eye retinal cell programmed cell death animal organ morphogenesis sensory system development system development eye development negative regulation of developmental process animal organ development programmed cell death involved in cell development anatomical structure morphogenesis regulation of compound eye retinal cell programmed cell death compound eye development sensory organ morphogenesis retinal cell programmed cell death negative regulation of retinal cell programmed cell death protein autoubiquitination primary metabolic process protein ubiquitination macromolecule modification metabolic process protein metabolic process macromolecule metabolic process post-translational protein modification protein modification process protein modification by small protein conjugation protein modification by small protein conjugation or removal regulation of protein modification process positive regulation of protein metabolic process positive regulation of biological process regulation of protein ubiquitination positive regulation of post-translational protein modification regulation of primary metabolic process positive regulation of metabolic process positive regulation of protein modification process positive regulation of macromolecule metabolic process regulation of protein modification by small protein conjugation or removal positive regulation of protein modification by small protein conjugation or removal positive regulation of protein ubiquitination regulation of post-translational protein modification regulation of protein metabolic process regulation of macromolecule metabolic process regulation of metabolic process protein neddylation cellular response to stimulus response to stimulus signaling negative regulation of signaling negative regulation of intracellular signal transduction regulation of signal transduction intracellular signal transduction negative regulation of cell communication cell communication negative regulation of JNK cascade regulation of intracellular signal transduction JNK cascade intracellular signaling cassette signal transduction regulation of signaling negative regulation of response to stimulus regulation of JNK cascade regulation of MAPK cascade negative regulation of signal transduction regulation of response to stimulus MAPK cascade regulation of cell communication negative regulation of MAPK cascade positive regulation of cell communication positive regulation of signal transduction positive regulation of response to stimulus positive regulation of cellular process regulation of Toll signaling pathway cell surface receptor signaling pathway positive regulation of Toll signaling pathway Toll signaling pathway positive regulation of signaling cell division sensory organ precursor cell division asymmetric cell division protein polyubiquitination positive regulation of locomotion regulation of cell motility female gamete generation epithelial cell differentiation positive regulation of cell migration follicle cell of egg chamber development positive regulation of epithelial cell migration tissue migration ameboidal-type cell migration positive regulation of cell motility regulation of cell migration cell migration regulation of multicellular organismal process epithelial cell migration cell motility regulation of epithelial cell migration locomotion epithelium development positive regulation of border follicle cell migration regulation of border follicle cell migration oogenesis follicle cell of egg chamber migration tissue development epithelium migration epithelial cell development border follicle cell migration regulation of locomotion protein K48-linked ubiquitination imaginal disc morphogenesis antennal morphogenesis appendage development antennal development eye-antennal disc morphogenesis instar larval or pupal development metamorphosis imaginal disc-derived appendage morphogenesis appendage morphogenesis eye-antennal disc development imaginal disc-derived appendage development instar larval or pupal morphogenesis imaginal disc development post-embryonic animal morphogenesis post-embryonic development chaeta development Wnt signaling pathway regulation of canonical Wnt signaling pathway canonical Wnt signaling pathway positive regulation of Wnt signaling pathway positive regulation of canonical Wnt signaling pathway regulation of Wnt signaling pathway cell cycle regulation of cell cycle	intracellular anatomical structure cytoplasm cellular anatomical entity cytosol perinuclear region of cytoplasm membrane-bounded organelle intracellular organelle organelle nucleus intracellular membrane-bounded organelle
K, L, M, N, O K, L, M, N, O, P, Q, R, S, T	Nedd2-like caspase CG8091-PA	cysteine-type peptidase activity peptidase activity catalytic activity, acting on a protein cysteine-type endopeptidase activity hydrolase activity catalytic activity endopeptidase activity identical protein binding protein binding binding protein homodimerization activity protein dimerization activity cysteine-type endopeptidase activity involved in apoptotic signaling pathway cysteine-type endopeptidase activity involved in apoptotic process cysteine-type peptidase activity peptidase activity catalytic activity, acting on a protein cysteine-type endopeptidase activity hydrolase activity catalytic activity endopeptidase activity identical protein binding protein binding binding protein homodimerization activity protein dimerization activity cysteine-type endopeptidase activity involved in apoptotic signaling pathway cysteine-type endopeptidase activity involved in apoptotic process CARD domain binding protein domain specific binding	developmental process multicellular organism development multicellular organismal process embryo development ending in birth or egg hatching anatomical structure development embryo development embryonic development via the syncytial blastoderm metamorphosis compound eye retinal cell programmed cell death regulation of cellular process positive regulation of compound eye retinal cell programmed cell death cellular developmental process regulation of developmental process sensory organ development developmental process multicellular organism development multicellular organismal process embryo development ending in birth or egg hatching anatomical structure development embryo development embryonic development via the syncytial blastoderm metamorphosis compound eye retinal cell programmed cell death regulation of cellular process positive regulation of compound eye retinal cell programmed cell death cellular developmental process regulation of developmental process sensory organ development positive regulation of biological process visual system development cell development regulation of programmed cell death positive regulation of developmental process eye morphogenesis compound eye morphogenesis cell differentiation regulation of retinal cell programmed cell death animal organ morphogenesis sensory system development positive regulation of cellular process system development regulation of biological process positive regulation of programmed cell death eye development biological regulation animal organ development cell death positive regulation of retinal cell programmed cell death programmed cell death involved in cell development anatomical structure morphogenesis regulation of compound eye retinal cell programmed cell death compound eye development sensory organ morphogenesis retinal cell programmed cell death cellular process programmed cell death cellular biosynthetic process cellular metabolic process primary metabolic process gene expression macromolecule biosynthetic process protein maturation protein autoprocessing biosynthetic process proteolysis protein processing metabolic process protein metabolic process macromolecule metabolic process central nervous system development nervous system development spermatid development spermatid differentiation sexual reproduction spermatogenesis reproductive process cellularization cellular process involved in reproduction in multicellular organism developmental process involved in reproduction gamete generation multicellular organismal reproductive process sperm individualization male gamete generation anatomical structure formation involved in morphogenesis germ cell development developmental maturation generation of neurons neurogenesis neuron differentiation neuron remodeling anatomical structure maturation neuron development neuron maturation cell maturation apoptotic process regulation of apoptotic process positive regulation of apoptotic process hemocyte differentiation hemopoiesis immune system process hemocyte development cell projection organization plasma membrane bounded cell projection morphogenesis neuron projection development cell morphogenesis cellular component organization cell projection morphogenesis neuron projection morphogenesis dendrite development cellular component organization or biogenesis plasma membrane bounded cell projection organization dendrite morphogenesis cell morphogenesis involved in neuron differentiation pigment metabolic process melanization defense response biological process involved in interspecies interaction between organisms response to stimulus immune response response to other organism defense response organic hydroxy compound metabolic process defense response to symbiont response to external stimulus response to biotic stimulus melanin metabolic process secondary metabolic process defense response to other organism response to stress phenol-containing compound metabolic process innate immune response response to external biotic stimulus determination of adult lifespan negative regulation of cell population proliferation cell population proliferation regulation of cell population proliferation negative regulation of cellular process negative regulation of biological process programmed necrotic cell death head involution embryonic morphogenesis ectopic germ cell programmed cell death chaeta development oogenesis female gamete generation apoptotic process involved in development nurse cell apoptotic process zymogen activation salivary gland histolysis gland development salivary gland development instar larval or pupal development anatomical structure regression gland morphogenesis instar larval or pupal morphogenesis salivary gland morphogenesis post-embryonic animal morphogenesis post-embryonic development exocrine system development	cell periphery plasma membrane membrane cellular anatomical entity intracellular anatomical structure cytoplasm protein-containing complex apoptosome cytosol membrane-bounded organelle intracellular organelle organelle nucleus intracellular membrane-bounded organelle

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F, G, H, I, J	IPR050784	Inhibitor of Apoptosis	Family
A, B, C, D, E A, B, C, D, E, F, G, H, I, J	IPR013083	Zinc finger, RING/FYVE/PHD-type	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H, I, J	IPR001370	BIR repeat	Repeat
A, B, C, D, E A, B, C, D, E, F, G, H, I, J	IPR001841	Zinc finger, RING-type	Domain
K, L, M, N, O K, L, M, N, O, P, Q, R, S, T	IPR001309	Peptidase C14, p20 domain	Domain
K, L, M, N, O K, L, M, N, O, P, Q, R, S, T	IPR011600	Peptidase C14, caspase domain	Domain
K, L, M, N, O K, L, M, N, O, P, Q, R, S, T	IPR015917	Peptidase C14A, caspase catalytic domain	Domain
K, L, M, N, O K, L, M, N, O, P, Q, R, S, T	IPR011029	Death-like domain superfamily	Homologous Superfamily
K, L, M, N, O K, L, M, N, O, P, Q, R, S, T	IPR029030	Caspase-like domain superfamily	Homologous Superfamily
K, L, M, N, O K, L, M, N, O, P, Q, R, S, T	IPR033139	Peptidase family C14A, cysteine active site	Active Site
K, L, M, N, O K, L, M, N, O, P, Q, R, S, T	IPR002138	Peptidase C14, caspase non-catalytic subunit p10	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.