Annotations: 1PJ7

Structure of dimethylglycine oxidase of Arthrobacter globiformis in complex with folinic acid

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d1pj7a1	All beta proteins	Elongation factor/aminomethyltransferase common domain	Aminomethyltransferase beta-barrel domain	Aminomethyltransferase beta-barrel domain	N,N-dimethylglycine oxidase, C-terminal domain	(Arthrobacter globiformis ) [TaxId: 1665 ],	SCOPe (2.08)
A	d1pj7a2	Alpha and beta proteins (a/b)	FAD/NAD(P)-binding domain	FAD/NAD(P)-binding domain	FAD-linked reductases, N-terminal domain	N,N-dimethylglycine oxidase	(Arthrobacter globiformis ) [TaxId: 1665 ],	SCOPe (2.08)
A	d1pj7a3	Alpha and beta proteins (a+b)	FAD-linked reductases, C-terminal domain	FAD-linked reductases, C-terminal domain	L-aminoacid/polyamine oxidase	N,N-dimethylglycine oxidase	(Arthrobacter globiformis ) [TaxId: 1665 ],	SCOPe (2.08)
A	d1pj7a4	Alpha and beta proteins (a+b)	Folate-binding domain	Folate-binding domain	Aminomethyltransferase folate-binding domain	N,N-dimethylglycine oxidase domain 3	(Arthrobacter globiformis ) [TaxId: 1665 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2B Superfamily	Flavoreductase-like	8017496	3000055	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Folate-binding domain-like	8001552	3000025	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Aminomethyltransferase beta-barrel domain-like	8056079	3000024	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Trypsin	e1pj7A1	A: beta barrels	X: Phage tail fiber protein trimerization domain	H: LigT-related	T: LigT-related	F: Trypsin	ECOD (v294.2)
A	YceM-like_C	e1pj7A3	A: beta barrels	X: ETN0001 domain-like	H: ETN0001 domain-like	T: Mss4-like	F: YceM-like_C	ECOD (v294.2)
A	NAD_binding_8	e1pj7A4	A: beta barrels	X: HTH	H: HTH	T: winged helix domain	F: NAD_binding_8	ECOD (v294.2)
A	Brix	e1pj7A5	A: beta barrels	X: Trefoil/Plexin domain-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: Brix	ECOD (v294.2)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	3.50.50.60	Alpha Beta	3-Layer(bba) Sandwich	FAD/NAD(P)-binding domain	FAD/NAD(P)-binding domain	CATH (4.3.0)
A	3.30.9.10	Alpha Beta	2-Layer Sandwich	D-Amino Acid Oxidase	Chain A, domain 2	CATH (4.3.0)
A	3.30.1360.120	Alpha Beta	2-Layer Sandwich	Gyrase A	domain 2	CATH (4.3.0)
A	3.30.70.1400	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits	Aminomethyltransferase beta-barrel domains	CATH (4.3.0)
A	2.40.30.110	Mainly Beta	Beta Barrel	Elongation Factor Tu (Ef-tu)	domain 3	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	N,N-dimethylglycine oxidase	dimethylglycine oxidase activity oxidoreductase activity oxidoreductase activity, acting on the CH-NH group of donors, oxygen as acceptor oxidoreductase activity, acting on the CH-NH group of donors catalytic activity binding nucleoside phosphate binding nucleotide binding heterocyclic compound binding small molecule binding	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR028896	Aminomethyltransferase-like	Family
A	IPR013977	Aminomethyltransferase, C-terminal domain	Domain
A	IPR027266	Aminomethyltransferase superfamily	Homologous Superfamily
A	IPR032503	FAD dependent oxidoreductase, central domain	Domain
A	IPR029043	Glycine cleavage T-protein/YgfZ, C-terminal	Homologous Superfamily
A	IPR006076	FAD dependent oxidoreductase	Domain
A	IPR036188	FAD/NAD(P)-binding domain superfamily	Homologous Superfamily
A	IPR006222	GCVT, N-terminal domain	Domain

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