1PGR
2:2 COMPLEX OF G-CSF WITH ITS RECEPTOR
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | 4-helical cytokines | 8037058 | 3001717 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | 4-helical cytokines | 8037058 | 3001717 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | 4-helical cytokines | 8037058 | 3001717 | SCOP2B (2022-06-29) |
G | SCOP2B Superfamily | 4-helical cytokines | 8037058 | 3001717 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Fibronectin type III | 8055527 | 3002063 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Fibronectin type III | 8055139 | 3002063 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Fibronectin type III | 8055527 | 3002063 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Fibronectin type III | 8055139 | 3002063 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | Fibronectin type III | 8055527 | 3002063 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | Fibronectin type III | 8055139 | 3002063 | SCOP2B (2022-06-29) |
H | SCOP2B Superfamily | Fibronectin type III | 8055527 | 3002063 | SCOP2B (2022-06-29) |
H | SCOP2B Superfamily | Fibronectin type III | 8055139 | 3002063 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | IL6 | e1pgrA1 | A: alpha bundles | X: Ferritin/Heme oxygenase/4-helical cytokines | H: 4-helical cytokines (From Topology) | T: 4-helical cytokines | F: IL6 | ECOD (1.6) |
C | IL6 | e1pgrC1 | A: alpha bundles | X: Ferritin/Heme oxygenase/4-helical cytokines | H: 4-helical cytokines (From Topology) | T: 4-helical cytokines | F: IL6 | ECOD (1.6) |
E | IL6 | e1pgrE1 | A: alpha bundles | X: Ferritin/Heme oxygenase/4-helical cytokines | H: 4-helical cytokines (From Topology) | T: 4-helical cytokines | F: IL6 | ECOD (1.6) |
G | IL6 | e1pgrG1 | A: alpha bundles | X: Ferritin/Heme oxygenase/4-helical cytokines | H: 4-helical cytokines (From Topology) | T: 4-helical cytokines | F: IL6 | ECOD (1.6) |
B | EpoR_lig-bind | e1pgrB1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: EpoR_lig-bind | ECOD (1.6) |
B | fn3_1 | e1pgrB2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: fn3_1 | ECOD (1.6) |
D | EpoR_lig-bind | e1pgrD3 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: EpoR_lig-bind | ECOD (1.6) |
D | fn3_1 | e1pgrD1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: fn3_1 | ECOD (1.6) |
F | EpoR_lig-bind | e1pgrF1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: EpoR_lig-bind | ECOD (1.6) |
F | fn3_1 | e1pgrF2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: fn3_1 | ECOD (1.6) |
H | EpoR_lig-bind | e1pgrH3 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: EpoR_lig-bind | ECOD (1.6) |
H | fn3_1 | e1pgrH2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: fn3_1 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.20.1250.10 | Mainly Alpha | Up-down Bundle | Growth Hormone | Chain: A | CATH (4.3.0) |
C | 1.20.1250.10 | Mainly Alpha | Up-down Bundle | Growth Hormone | Chain: A | CATH (4.3.0) |
E | 1.20.1250.10 | Mainly Alpha | Up-down Bundle | Growth Hormone | Chain: A | CATH (4.3.0) |
G | 1.20.1250.10 | Mainly Alpha | Up-down Bundle | Growth Hormone | Chain: A | CATH (4.3.0) |
B | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
D | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
F | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
H | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF16647 | Granulocyte colony-stimulating factor (GCSF) | Granulocyte colony-stimulating factor | GCSF is a family of higher eukaryotic granulocyte colony-stimulating factor proteins. Granulocyte colony-stimulating factors are cytokines that are involved in haematopoeisis. They control the production, differentiation and function of white blood ... | Domain | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR030473 | Interleukin-6/GCSF/MGF, conserved site | Conserved Site | |
IPR009079 | Four-helical cytokine-like, core | Homologous Superfamily | |
IPR040117 | GCSF/MGF | Family | |
IPR030474 | Interleukin-6/GCSF/MGF | Family | |
IPR036179 | Immunoglobulin-like domain superfamily | Homologous Superfamily | |
IPR003961 | Fibronectin type III | Domain | |
IPR013783 | Immunoglobulin-like fold | Homologous Superfamily | |
IPR003529 | Long hematopoietin receptor, Gp130 family 2, conserved site | Conserved Site | |
IPR050379 | Type I Cytokine Receptor | Family | |
IPR036116 | Fibronectin type III superfamily | Homologous Superfamily | |
IPR010457 | Immunoglobulin C2-set-like, ligand-binding | Domain |