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Dimeric Rous Sarcoma virus Capsid protein structure with an upstream 25-amino acid residue extension of C-terminal of Gag p10 protein External Resource: Annotation Chains Type Family Name Domain Identifier Family Identifier Provenance Source (Version) A SCOP2B Superfamily Retrovirus capsid protein, N-terminal core domain 8037873 3000745 SCOP2B (2022-06-29)
Chains Family Name Domain Identifier Architecture Possible Homology Homology Topology Family Provenance Source (Version) A Gag_p24_like e1p7nA1 A: alpha bundles X: Retrovirus capsid protein H: Retrovirus capsid protein N-terminal domain (From Topology) T: Retrovirus capsid protein N-terminal domain F: Gag_p24_like ECOD (1.6)
Chains Accession Name Description Comments Source PF00607 gag protein p24 N-terminal domain (Gag_p24) gag protein p24 N-terminal domain p24 forms inner protein layer of the nucleocapsid. ELISA tests for p24 is the most commonly used method to demonstrate virus replication both in vivo and in vitro. Domain
Chains Polymer Molecular Function Biological Process Cellular Component GAG POLYPROTEIN CAPSID PROTEIN P27
Chains Accession Name Type IPR004028 Retroviral Gag polyprotein, M Domain IPR036875 Zinc finger, CCHC-type superfamily Homologous Superfamily IPR001995 Peptidase A2A, retrovirus, catalytic Domain IPR034170 Retropepsin-like catalytic domain Domain IPR001878 Zinc finger, CCHC-type Domain IPR008919 Retrovirus capsid, N-terminal Homologous Superfamily IPR010999 Retroviral matrix protein Homologous Superfamily IPR012344 Matrix protein, lentiviral and alpha-retroviral, N-terminal Homologous Superfamily IPR050195 Primate lentivirus group Gag polyprotein Family IPR021109 Aspartic peptidase domain superfamily Homologous Superfamily IPR001969 Aspartic peptidase, active site Active Site IPR018061 Retropepsins Domain IPR008916 Retrovirus capsid, C-terminal Homologous Superfamily