1OI4
Crystal Structure of yhbO from Escherichia coli
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d1oi4a1 | Alpha and beta proteins (a/b) | Flavodoxin-like | Class I glutamine amidotransferase-like | DJ-1/PfpI | Hypothetical protein YhbO | (Escherichia coli K-12 ) [TaxId: 83333 ], | SCOPe (2.08) |
A | d1oi4a2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Escherichia coli K-12 ) [TaxId: 83333 ], | SCOPe (2.08) |
B | d1oi4b1 | Alpha and beta proteins (a/b) | Flavodoxin-like | Class I glutamine amidotransferase-like | DJ-1/PfpI | Hypothetical protein YhbO | (Escherichia coli K-12 ) [TaxId: 83333 ], | SCOPe (2.08) |
B | d1oi4b2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Escherichia coli K-12 ) [TaxId: 83333 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | DJ-1/PfpI | 8019951 | 4003749 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Class I glutamine amidotransferase-like | 8032331 | 3001405 | SCOP2 (2022-06-29) |
B | SCOP2B Superfamily | Class I glutamine amidotransferase-like | 8032331 | 3001405 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF01965 | e1oi4A1 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Class I glutamine amidotransferase-like | T: Class I glutamine amidotransferase-like | F: PF01965 | ECOD (1.6) |
B | PF01965 | e1oi4B1 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Class I glutamine amidotransferase-like | T: Class I glutamine amidotransferase-like | F: PF01965 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.40.50.880 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Class I glutamine amidotransferase (GATase) domain | CATH (4.3.0) |
B | 3.40.50.880 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Class I glutamine amidotransferase (GATase) domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF01965 | DJ-1/PfpI family (DJ-1_PfpI) | DJ-1/PfpI family | The family includes the protease PfpI Swiss:Q51732 [1]. This domain is also found in transcriptional regulators such as Swiss:Q9RJG8. | Domain |