1NTC
SOLUTION STRUCTURE OF THE DNA-BINDING DOMAIN OF NTRC WITH THREE ALANINE SUBSTITUTIONS
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d1ntca1 | All alpha proteins | DNA/RNA-binding 3-helical bundle | Homeodomain-like | FIS-like | DNA-binding domain of NTRC | (Salmonella enterica subsp. enterica serovar Typhimurium ) [TaxId: 90371 ], | SCOPe (2.08) |
A | d1ntca2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Salmonella enterica subsp. enterica serovar Typhimurium ) [TaxId: 90371 ], | SCOPe (2.08) |
B | d1ntcb1 | All alpha proteins | DNA/RNA-binding 3-helical bundle | Homeodomain-like | FIS-like | DNA-binding domain of NTRC | (Salmonella enterica subsp. enterica serovar Typhimurium ) [TaxId: 90371 ], | SCOPe (2.08) |
B | d1ntcb2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Salmonella enterica subsp. enterica serovar Typhimurium ) [TaxId: 90371 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.10.10.60 | Mainly Alpha | Orthogonal Bundle | Arc Repressor Mutant, subunit A | Homeodomain-like | CATH (4.3.0) |
B | 1.10.10.60 | Mainly Alpha | Orthogonal Bundle | Arc Repressor Mutant, subunit A | Homeodomain-like | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF02954 | Bacterial regulatory protein, Fis family (HTH_8) | Bacterial regulatory protein, Fis family | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR009057 | Homedomain-like superfamily | Homologous Superfamily | |
IPR011006 | CheY-like superfamily | Homologous Superfamily | |
IPR002197 | DNA binding HTH domain, Fis-type | Domain | |
IPR001789 | Signal transduction response regulator, receiver domain | Domain | |
IPR002078 | RNA polymerase sigma factor 54 interaction domain | Domain | |
IPR025662 | Sigma-54 interaction domain, ATP-binding site 1 | Binding Site | |
IPR025944 | Sigma-54 interaction domain, conserved site | Conserved Site | |
IPR010114 | DNA-binding transcriptional regulator NtrC | Family | |
IPR003593 | AAA+ ATPase domain | Domain | |
IPR025943 | Sigma-54 interaction domain, ATP-binding site 2 | Binding Site | |
IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily |