1NFI
I-KAPPA-B-ALPHA/NF-KAPPA-B COMPLEX
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | NF-kappa-B/REL/DORSAL transcription factors C-terminal domain-like | 8054878 | 4007562 | SCOP2 (2021-05-27) |
A | SCOP2 Family | Rel/Dorsal transcription factors DNA-binding domain | 8027856 | 4001849 | SCOP2 (2021-05-27) |
A | SCOP2 Superfamily | E set domains | 8054879 | 3000070 | SCOP2 (2021-05-27) |
A | SCOP2 Superfamily | p53-like transcription factors | 8040235 | 3000758 | SCOP2 (2021-05-27) |
C | SCOP2B Superfamily | E set domains | 8054879 | 3000070 | SCOP2B (2021-05-27) |
C | SCOP2B Superfamily | p53-like transcription factors | 8040235 | 3000758 | SCOP2B (2021-05-27) |
E | SCOP2B Superfamily | Ankyrin repeat | 8057711 | 3000154 | SCOP2B (2021-05-27) |
F | SCOP2B Superfamily | Ankyrin repeat | 8057711 | 3000154 | SCOP2B (2021-05-27) |
D | SCOP2B Superfamily | E set domains | 8054865 | 3000070 | SCOP2B (2021-05-27) |
B | SCOP2B Superfamily | E set domains | 8054865 | 3000070 | SCOP2B (2021-05-27) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF16179 | e1nfiA1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF16179 | ECOD (1.6) |
A | PF00554 | e1nfiA2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Common fold of diphtheria toxin/transcription factors/cytochrome f | F: PF00554 | ECOD (1.6) |
C | PF16179 | e1nfiC1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF16179 | ECOD (1.6) |
C | PF00554 | e1nfiC2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Common fold of diphtheria toxin/transcription factors/cytochrome f | F: PF00554 | ECOD (1.6) |
E | PF12796 | e1nfiE1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: Ankyrin repeat (From Topology) | T: Ankyrin repeat | F: PF12796 | ECOD (1.6) |
F | PF12796 | e1nfiF1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: Ankyrin repeat (From Topology) | T: Ankyrin repeat | F: PF12796 | ECOD (1.6) |
D | PF16179 | e1nfiD1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF16179 | ECOD (1.6) |
B | PF16179 | e1nfiB1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF16179 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.60.40.340 | Mainly Beta | Sandwich | Immunoglobulin-like | Rel homology domain (RHD), DNA-binding domain | CATH (4.2.0) |
A | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.2.0) |
C | 2.60.40.340 | Mainly Beta | Sandwich | Immunoglobulin-like | Rel homology domain (RHD), DNA-binding domain | CATH (4.2.0) |
C | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.2.0) |
E | 1.25.40.20 | Mainly Alpha | Alpha Horseshoe | Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat | Ankyrin repeat-containing domain | CATH (4.2.0) |
F | 1.25.40.20 | Mainly Alpha | Alpha Horseshoe | Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat | Ankyrin repeat-containing domain | CATH (4.2.0) |
D | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.2.0) |
B | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.2.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF16179 | Rel homology dimerisation domain (RHD_dimer) | Rel homology dimerisation domain | The Rel homology domain (RHD) is composed of two structural domains, an N-terminal DNA_binding domain (Pfam:PF00554) and a C-terminal dimerisation domain. This is the dimerisation domain [1]. | Domain | |
PF00554 | Rel homology DNA-binding domain (RHD_DNA_bind) | Rel homology DNA-binding domain | Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immu ... | Domain | |
PF00023 | Ankyrin repeat (Ank) | Ankyrin repeat | - | Repeat | |
PF16179 | Rel homology dimerisation domain (RHD_dimer) | Rel homology dimerisation domain | The Rel homology domain (RHD) is composed of two structural domains, an N-terminal DNA_binding domain (Pfam:PF00554) and a C-terminal dimerisation domain. This is the dimerisation domain [1]. | Domain |