1N34

Structure of the Thermus thermophilus 30S ribosomal subunit in the presence of codon and crystallographically disordered near-cognate transfer rna anticodon stem-loop mismatched at the first codon position


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
J [auth I]d1n34i_ Alpha and beta proteins (a+b) Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Translational machinery components Ribosomal protein S9 (Thermus thermophilus ) [TaxId: 274 ], SCOPe (2.08)
K [auth J]d1n34j_ Alpha and beta proteins (a+b) Ferredoxin-like Ribosomal protein S10 Ribosomal protein S10 Ribosomal protein S10 (Thermus thermophilus ) [TaxId: 274 ], SCOPe (2.08)
L [auth K]d1n34k_ Alpha and beta proteins (a/b) Ribonuclease H-like motif Translational machinery components Ribosomal protein L18 and S11 Ribosomal protein S11 (Thermus thermophilus ) [TaxId: 274 ], SCOPe (2.08)
M [auth L]d1n34l_ All beta proteins OB-fold Nucleic acid-binding proteins Cold shock DNA-binding domain-like Ribosomal protein S12 (Thermus thermophilus ) [TaxId: 274 ], SCOPe (2.08)
N [auth M]d1n34m_ All alpha proteins S13-like H2TH domain S13-like H2TH domain Ribosomal protein S13 Ribosomal protein S13 (Thermus thermophilus ) [TaxId: 274 ], SCOPe (2.08)
O [auth N]d1n34n_ Small proteins Glucocorticoid receptor-like (DNA-binding domain) Glucocorticoid receptor-like (DNA-binding domain) Ribosomal protein S14 Ribosomal protein S14 (Thermus thermophilus ) [TaxId: 274 ], SCOPe (2.08)
P [auth O]d1n34o_ All alpha proteins S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain Ribosomal protein S15 Ribosomal protein S15 (Thermus thermophilus ) [TaxId: 274 ], SCOPe (2.08)
Q [auth P]d1n34p_ Alpha and beta proteins (a+b) Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16 (Thermus thermophilus ) [TaxId: 274 ], SCOPe (2.08)
R [auth Q]d1n34q_ All beta proteins OB-fold Nucleic acid-binding proteins Cold shock DNA-binding domain-like Ribosomal protein S17 (Thermus thermophilus ) [TaxId: 274 ], SCOPe (2.08)
S [auth R]d1n34r_ All alpha proteins DNA/RNA-binding 3-helical bundle Ribosomal protein S18 Ribosomal protein S18 Ribosomal protein S18 (Thermus thermophilus ) [TaxId: 274 ], SCOPe (2.08)
T [auth S]d1n34s_ Alpha and beta proteins (a+b) Ribosomal protein S19 Ribosomal protein S19 Ribosomal protein S19 Ribosomal protein S19 (Thermus thermophilus ) [TaxId: 274 ], SCOPe (2.08)
U [auth T]d1n34t_ All alpha proteins Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20 Ribosomal protein S20 (Thermus thermophilus ) [TaxId: 274 ], SCOPe (2.08)
Vd1n34v_ Peptides Arg-rich RNA binding peptides 30S ribosomal protein THX 30S ribosomal protein THX 30S ribosomal protein THX (Thermus thermophilus ) [TaxId: 274 ], SCOPe (2.08)
C [auth B]d1n34b_ Alpha and beta proteins (a/b) Flavodoxin-like Ribosomal protein S2 Ribosomal protein S2 Ribosomal protein S2 (Thermus thermophilus ) [TaxId: 274 ], SCOPe (2.08)
D [auth C]d1n34c1 Alpha and beta proteins (a+b) Alpha-lytic protease prodomain-like Prokaryotic type KH domain (KH-domain type II) Prokaryotic type KH domain (KH-domain type II) Ribosomal protein S3 N-terminal domain (Thermus thermophilus ) [TaxId: 274 ], SCOPe (2.08)
D [auth C]d1n34c2 Alpha and beta proteins (a+b) Ribosomal protein S3 C-terminal domain Ribosomal protein S3 C-terminal domain Ribosomal protein S3 C-terminal domain Ribosomal protein S3 C-terminal domain (Thermus thermophilus ) [TaxId: 274 ], SCOPe (2.08)
E [auth D]d1n34d_ Alpha and beta proteins (a+b) Alpha-L RNA-binding motif Alpha-L RNA-binding motif Ribosomal protein S4 (bacteria) Ribosomal protein S4 (Thermus thermophilus ) [TaxId: 274 ], SCOPe (2.08)
F [auth E]d1n34e1 Alpha and beta proteins (a+b) Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Translational machinery components Ribosomal protein S5, C-terminal domain (Thermus thermophilus ) [TaxId: 274 ], SCOPe (2.08)
F [auth E]d1n34e2 Alpha and beta proteins (a+b) dsRBD-like dsRNA-binding domain-like Ribosomal S5 protein, N-terminal domain Ribosomal S5 protein, N-terminal domain (Thermus thermophilus ) [TaxId: 274 ], SCOPe (2.08)
G [auth F]d1n34f_ Alpha and beta proteins (a+b) Ferredoxin-like Ribosomal protein S6 Ribosomal protein S6 Ribosomal protein S6 (Thermus thermophilus ) [TaxId: 274 ], SCOPe (2.08)
H [auth G]d1n34g_ All alpha proteins Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7 (Thermus thermophilus ) [TaxId: 274 ], SCOPe (2.08)
I [auth H]d1n34h_ Alpha and beta proteins (a+b) Ribosomal protein S8 Ribosomal protein S8 Ribosomal protein S8 Ribosomal protein S8 (Thermus thermophilus ) [TaxId: 274 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
J [auth I]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like 8037678 3000100 SCOP2B (2022-06-29)
K [auth J]SCOP2B SuperfamilyRibosomal protein S10 8044019 3001336 SCOP2B (2022-06-29)
L [auth K]SCOP2B SuperfamilyTranslational machinery components 8044020 3000571 SCOP2B (2022-06-29)
M [auth L]SCOP2B SuperfamilyNucleic acid-binding proteins 8044021 3000135 SCOP2B (2022-06-29)
N [auth M]SCOP2B SuperfamilyS13-like H2TH domain 8003708 3000053 SCOP2B (2022-06-29)
O [auth N]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain) 8052585 3000068 SCOP2B (2022-06-29)
Q [auth P]SCOP2B SuperfamilyRibosomal protein S16 8044025 3000680 SCOP2B (2022-06-29)
R [auth Q]SCOP2B SuperfamilyNucleic acid-binding proteins 8044026 3000135 SCOP2B (2022-06-29)
S [auth R]SCOP2B SuperfamilyRibosomal protein S18 8044028 3001191 SCOP2B (2022-06-29)
T [auth S]SCOP2B SuperfamilyRibosomal protein S19 8044027 3000686 SCOP2B (2022-06-29)
U [auth T]SCOP2B SuperfamilyRibosomal protein S20 8044029 3001362 SCOP2B (2022-06-29)
C [auth B]SCOP2B SuperfamilySIS domain/Ribosomal protein S2-like 8044010 3001397 SCOP2B (2022-06-29)
D [auth C]SCOP2B SuperfamilyRibosomal protein S3 C-terminal domain 8044012 3001053 SCOP2B (2022-06-29)
D [auth C]SCOP2B SuperfamilyProkaryotic type KH domain (KH-domain type II) 8044011 3001043 SCOP2B (2022-06-29)
E [auth D]SCOP2B SuperfamilyAlpha-L RNA-binding motif 8044014 3001473 SCOP2B (2022-06-29)
F [auth E]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like 8044015 3000100 SCOP2B (2022-06-29)
F [auth E]SCOP2B SuperfamilydsRNA-binding domain-like 8044017 3000985 SCOP2B (2022-06-29)
H [auth G]SCOP2B SuperfamilyRibosomal protein S7 8033523 3000799 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
J [auth I]Ribosomal_S9e1n34I1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S9ECOD (1.6)
K [auth J]Ribosomal_S10e1n34J1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: Ribosomal_S10ECOD (1.6)
L [auth K]Ribosomal_S11e1n34K1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_S11ECOD (1.6)
M [auth L]Ribosom_S12_S23e1n34L1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosom_S12_S23ECOD (1.6)
N [auth M]Ribosomal_S13_1e1n34M1 A: alpha arraysX: HhH/H2THH: H2TH (From Topology)T: H2THF: Ribosomal_S13_1ECOD (1.6)
O [auth N]Ribosomal_S14e1n34N1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_S14ECOD (1.6)
P [auth O]Ribosomal_S15_1e1n34O1 A: alpha arraysX: S15/NS1 RNA-binding domain (From Topology)H: S15/NS1 RNA-binding domain (From Topology)T: S15/NS1 RNA-binding domainF: Ribosomal_S15_1ECOD (1.6)
Q [auth P]Ribosomal_S16_1e1n34P1 A: a+b two layersX: Ribosomal protein S16 (From Topology)H: Ribosomal protein S16 (From Topology)T: Ribosomal protein S16F: Ribosomal_S16_1ECOD (1.6)
R [auth Q]Ribosomal_S17_1e1n34Q1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S17_1ECOD (1.6)
S [auth R]Ribosomal_S18e1n34R1 A: alpha arraysX: HTHH: HTHT: tri-helicalF: Ribosomal_S18ECOD (1.6)
T [auth S]Ribosomal_S19e1n34S1 A: a+b two layersX: Ribosomal protein S19 (From Topology)H: Ribosomal protein S19 (From Topology)T: Ribosomal protein S19F: Ribosomal_S19ECOD (1.6)
U [auth T]Ribosomal_S20pe1n34T1 A: alpha bundlesX: Spectrin repeat-likeH: Ribosomal protein S20 (From Topology)T: Ribosomal protein S20F: Ribosomal_S20pECOD (1.6)
C [auth B]Ribosomal_S2e1n34B1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Ribosomal protein S2/SIS domain (From Topology)T: Ribosomal protein S2/SIS domainF: Ribosomal_S2ECOD (1.6)
D [auth C]Ribosomal_S3_Ce1n34C1 A: a+b two layersX: T-foldH: Ribosomal protein S3-C (From Topology)T: Ribosomal protein S3-CF: Ribosomal_S3_CECOD (1.6)
D [auth C]KH_2_1e1n34C2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Prokaryotic type KH domain (KH-domain type II)F: KH_2_1ECOD (1.6)
E [auth D]S4e1n34D1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: S4ECOD (1.6)
F [auth E]Ribosomal_S5_Ce1n34E2 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S5_CECOD (1.6)
F [auth E]Ribosomal_S5e1n34E1 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: Ribosomal_S5ECOD (1.6)
G [auth F]Ribosomal_S6e1n34F1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S6 (From Topology)T: Ribosomal protein S6F: Ribosomal_S6ECOD (1.6)
H [auth G]Ribosomal_S7_1e1n34G1 A: alpha arraysX: Ribosomal protein S7 (From Topology)H: Ribosomal protein S7 (From Topology)T: Ribosomal protein S7F: Ribosomal_S7_1ECOD (1.6)
I [auth H]Ribosomal_S8_Ne1n34H1 A: a+b two layersX: R3H domain-likeH: Ribosomal protein S8, N-terminal domain (From Topology)T: Ribosomal protein S8, N-terminal domainF: Ribosomal_S8_NECOD (1.6)
I [auth H]Ribosomal_S8_Ce1n34H2 A: a+b two layersX: Ribosomal protein S8, C-terminal domain (From Topology)H: Ribosomal protein S8, C-terminal domain (From Topology)T: Ribosomal protein S8, C-terminal domainF: Ribosomal_S8_CECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
J [auth I]3.30.230.10 Alpha Beta 2-Layer Sandwich Ribosomal Protein S5 domain 2CATH (4.3.0)
K [auth J]3.30.70.600 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits Ribosomal protein S10CATH (4.3.0)
L [auth K]3.30.420.80 Alpha Beta 2-Layer Sandwich Nucleotidyltransferase domain 5CATH (4.3.0)
M [auth L]2.40.50.140 Mainly Beta Beta Barrel OB fold (Dihydrolipoamide Acetyltransferase, E2P) Nucleic acid-binding proteinsCATH (4.3.0)
N [auth M]1.10.8.50 Mainly Alpha Orthogonal Bundle Helicase, Ruva Protein domain 3CATH (4.3.0)
N [auth M]4.10.910.10 Few Secondary Structures Irregular 30s ribosomal protein s13 domain 2CATH (4.3.0)
O [auth N]4.10.830.10 Few Secondary Structures Irregular 30s Ribosomal Protein S14 Chain NCATH (4.3.0)
P [auth O]1.10.287.10 Mainly Alpha Orthogonal Bundle Helix Hairpins S15/NS1, RNA-bindingCATH (4.3.0)
Q [auth P]3.30.1320.10 Alpha Beta 2-Layer Sandwich S16 Ribosomal Protein Chain: ACATH (4.3.0)
R [auth Q]2.40.50.140 Mainly Beta Beta Barrel OB fold (Dihydrolipoamide Acetyltransferase, E2P) Nucleic acid-binding proteinsCATH (4.3.0)
S [auth R]4.10.640.10 Few Secondary Structures Irregular 30s Ribosomal Protein S18 Ribosomal protein S18CATH (4.3.0)
T [auth S]3.30.860.10 Alpha Beta 2-Layer Sandwich 30s Ribosomal Protein S19 Chain ACATH (4.3.0)
U [auth T]1.20.58.110 Mainly Alpha Up-down Bundle Methane Monooxygenase Hydroxylase Chain G, domain 1CATH (4.3.0)
C [auth B]3.40.50.10490 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Glucose-6-phosphate isomerase like proteinCATH (4.3.0)
C [auth B]1.10.287.610 Mainly Alpha Orthogonal Bundle Helix Hairpins Helix hairpin binCATH (4.3.0)
D [auth C]3.30.300.20 Alpha Beta 2-Layer Sandwich GMP Synthetase Chain A, domain 3CATH (4.3.0)
D [auth C]3.30.1140.32 Alpha Beta 2-Layer Sandwich Ribosomal protein S3 C-terminal domain Ribosomal protein S3, C-terminal domainCATH (4.3.0)
E [auth D]1.10.1050.10 Mainly Alpha Orthogonal Bundle Ribosomal Protein S4 Delta 41 Chain A, domain 1CATH (4.3.0)
E [auth D]3.10.290.10 Alpha Beta Roll Structural Genomics Hypothetical 15.5 Kd Protein In mrcA-pckA Intergenic Region Chain ACATH (4.3.0)
F [auth E]3.30.160.20 Alpha Beta 2-Layer Sandwich Double Stranded RNA Binding Domain CATH (4.3.0)
F [auth E]3.30.230.10 Alpha Beta 2-Layer Sandwich Ribosomal Protein S5 domain 2CATH (4.3.0)
G [auth F]3.30.70.60 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits Ribosomal protein S6/Translation elongation factor EF1BCATH (4.3.0)
H [auth G]1.10.455.10 Mainly Alpha Orthogonal Bundle Ribosomal Protein S7 Ribosomal protein S7/S5CATH (4.3.0)
I [auth H]3.30.1370.30 Alpha Beta 2-Layer Sandwich Ribosomal Protein S8 Chain: A, domain 1CATH (4.3.0)
I [auth H]3.30.1490.10 Alpha Beta 2-Layer Sandwich Dna Ligase domain 1CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
J [auth I]PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family
K [auth J]PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes.Domain
L [auth K]PF00411Ribosomal protein S11 (Ribosomal_S11)Ribosomal protein S11- Family
M [auth L]PF00164Ribosomal protein S12/S23 (Ribosom_S12_S23)Ribosomal protein S12/S23- Family
N [auth M]PF00416Ribosomal protein S13/S18 (Ribosomal_S13)Ribosomal protein S13/S18- Family
O [auth N]PF00253Ribosomal protein S14p/S29e (Ribosomal_S14)Ribosomal protein S14p/S29e- Family
P [auth O]PF00312Ribosomal protein S15 (Ribosomal_S15)Ribosomal protein S15- Domain
Q [auth P]PF00886Ribosomal protein S16 (Ribosomal_S16)Ribosomal protein S16- Family
R [auth Q]PF00366Ribosomal protein S17 (Ribosomal_S17)Ribosomal protein S17- Domain
S [auth R]PF01084Ribosomal protein S18 (Ribosomal_S18)Ribosomal protein S18- Family
T [auth S]PF00203Ribosomal protein S19 (Ribosomal_S19)Ribosomal protein S19- Domain
PF1707030S ribosomal protein Thx (Thx)30S ribosomal protein Thx- Family
C [auth B]PF00318Ribosomal protein S2 (Ribosomal_S2)Ribosomal protein S2- Family
D [auth C]PF07650KH domain (KH_2)KH domain- Domain
D [auth C]PF00189Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C)Ribosomal protein S3, C-terminal domainThis family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer.Domain
E [auth D]PF00163Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4)Ribosomal protein S4/S9 N-terminal domain- Family
E [auth D]PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.
Domain
F [auth E]PF03719Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)Ribosomal protein S5, C-terminal domain- Domain
F [auth E]PF00333Ribosomal protein S5, N-terminal domain (Ribosomal_S5)Ribosomal protein S5, N-terminal domain- Domain
G [auth F]PF01250Ribosomal protein S6 (Ribosomal_S6)Ribosomal protein S6- Domain
H [auth G]PF00177Ribosomal protein S7p/S5e (Ribosomal_S7)Ribosomal protein S7p/S5eThis family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes.Domain
I [auth H]PF00410Ribosomal protein S8 (Ribosomal_S8)Ribosomal protein S8- Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
16S RIBOSOMAL RNA---
J [auth I]30S RIBOSOMAL PROTEIN S9
K [auth J]30S RIBOSOMAL PROTEIN S10
L [auth K]30S RIBOSOMAL PROTEIN S11
M [auth L]30S RIBOSOMAL PROTEIN S12
N [auth M]30S RIBOSOMAL PROTEIN S13
O [auth N]30S RIBOSOMAL PROTEIN S14
P [auth O]30S RIBOSOMAL PROTEIN S15
Q [auth P]30S RIBOSOMAL PROTEIN S16
R [auth Q]30S RIBOSOMAL PROTEIN S17
S [auth R]30S RIBOSOMAL PROTEIN S18
B [auth Z]A-SITE MESSENGER RNA FRAGMENT---
T [auth S]30S RIBOSOMAL PROTEIN S19
U [auth T]30S RIBOSOMAL PROTEIN S20
30S RIBOSOMAL PROTEIN THX -
C [auth B]30S RIBOSOMAL PROTEIN S2
D [auth C]30S RIBOSOMAL PROTEIN S3
E [auth D]30S RIBOSOMAL PROTEIN S4
F [auth E]30S RIBOSOMAL PROTEIN S5
G [auth F]30S RIBOSOMAL PROTEIN S6
H [auth G]30S RIBOSOMAL PROTEIN S7
I [auth H]30S RIBOSOMAL PROTEIN S8

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
J [auth I]IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
J [auth I]IPR023035Small ribosomal subunit protein uS9, bacterial/plastidFamily
J [auth I]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
J [auth I]IPR000754Small ribosomal subunit protein uS9Family
J [auth I]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
K [auth J]IPR001848Small ribosomal subunit protein uS10Family
K [auth J]IPR027486Small ribosomal subunit protein uS10 domainDomain
K [auth J]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
K [auth J]IPR018268Small ribosomal subunit protein uS10, conserved siteConserved Site
L [auth K]IPR001971Small ribosomal subunit protein uS11Family
L [auth K]IPR019981Small ribosomal subunit protein uS11, bacterial-typeFamily
L [auth K]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
L [auth K]IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
M [auth L]IPR006032Small ribosomal subunit protein uS12Family
M [auth L]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
M [auth L]IPR005679Ribosomal protein uS12, bacterial-typeFamily
N [auth M]IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
N [auth M]IPR001892Small ribosomal subunit protein uS13Family
N [auth M]IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
N [auth M]IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
N [auth M]IPR019980Small ribosomal subunit protein uS13, bacterial-typeFamily
O [auth N]IPR023053Small ribosomal subunit protein uS14, bacteriaFamily
O [auth N]IPR001209Small ribosomal subunit protein uS14Family
O [auth N]IPR018271Small ribosomal subunit protein uS14, conserved siteConserved Site
O [auth N]IPR043140Small ribosomal subunit protein uS14 superfamilyHomologous Superfamily
P [auth O]IPR005290Small ribosomal subunit protein uS15, bacterial-typeFamily
P [auth O]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
P [auth O]IPR000589Small ribosomal subunit protein uS15Family
Q [auth P]IPR023803Small ribosomal subunit protein bS16 domain superfamilyHomologous Superfamily
Q [auth P]IPR000307Small ribosomal subunit protein bS16Family
R [auth Q]IPR019984Small ribosomal subunit protein uS17, bacteria/chloroplastFamily
R [auth Q]IPR019979Small ribosomal subunit protein uS17, conserved siteConserved Site
R [auth Q]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
R [auth Q]IPR000266Small ribosomal subunit protein uS17Family
S [auth R]IPR001648Small ribosomal subunit protein bS18Family
S [auth R]IPR018275Small ribosomal subunit protein bS18, conserved siteConserved Site
S [auth R]IPR036870Small ribosomal subunit protein bS18 superfamilyHomologous Superfamily
T [auth S]IPR002222Small ribosomal subunit protein uS19Family
T [auth S]IPR005732Small ribosomal subunit protein uS19, bacterial-typeFamily
T [auth S]IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
T [auth S]IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site
U [auth T]IPR036510Small ribosomal subunit protein bS20 superfamilyHomologous Superfamily
U [auth T]IPR002583Small ribosomal subunit protein bS20Family
IPR030826Small ribosomal subunit protein bTHX/bTHXc/bTHXmFamily
IPR031414Small ribosomal subunit protein bTHXFamily
C [auth B]IPR005706Small ribosomal subunit protein uS2, bacteria/mitochondria/plastidFamily
C [auth B]IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
C [auth B]IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
C [auth B]IPR001865Small ribosomal subunit protein uS2Family
D [auth C]IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
D [auth C]IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
D [auth C]IPR004087K Homology domainDomain
D [auth C]IPR004044K Homology domain, type 2Domain
D [auth C]IPR015946K homology domain-like, alpha/betaHomologous Superfamily
D [auth C]IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
D [auth C]IPR005704Small ribosomal subunit protein uS3, bacterial-typeFamily
D [auth C]IPR018280Small ribosomal subunit protein uS3, conserved siteConserved Site
E [auth D]IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
E [auth D]IPR002942RNA-binding S4 domainDomain
E [auth D]IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
E [auth D]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
E [auth D]IPR005709Small ribosomal subunit protein uS4, bacterial-typeFamily
E [auth D]IPR022801Small ribosomal subunit protein uS4Family
F [auth E]IPR000851Small ribosomal subunit protein uS5Family
F [auth E]IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
F [auth E]IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
F [auth E]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
F [auth E]IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
F [auth E]IPR005712Small ribosomal subunit protein uS5, bacterial-typeFamily
F [auth E]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
G [auth F]IPR020815Small ribosomal subunit protein bS6, conserved siteConserved Site
G [auth F]IPR000529Small ribosomal subunit protein bS6Family
G [auth F]IPR020814Small ribosomal subunit protein bS6, plastid/chloroplastFamily
G [auth F]IPR035980Small ribosomal subunit protein bS6 superfamilyHomologous Superfamily
G [auth F]IPR014717Translation elongation factor EF1B/small ribosomal subunit protein bS6Homologous Superfamily
H [auth G]IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
H [auth G]IPR000235Small ribosomal subunit protein uS7Family
H [auth G]IPR005717Small ribosomal subunit protein uS7, bacterial/organellar-typeFamily
H [auth G]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
H [auth G]IPR023798Small ribosomal subunit protein uS7 domainDomain
I [auth H]IPR000630Small ribosomal subunit protein uS8Family
I [auth H]IPR047863Small ribosomal subunit protein uS8, conserved siteConserved Site
I [auth H]IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily