1MRZ
Crystal structure of a flavin binding protein from Thermotoga Maritima, TM379
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
B | SCOP2B Superfamily | Nucleotidylyl transferase | 8042307 | 3001541 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Riboflavin kinase-like | 8042305 | 3000067 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Riboflavin kinase-like | 8042305 | 3000067 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Nucleotidylyl transferase | 8042307 | 3001541 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | Flavokinase | e1mrzB1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Alanine racemase-C | F: Flavokinase | ECOD (1.6) |
B | FAD_syn | e1mrzB2 | A: a/b three-layered sandwiches | X: HUP domain-like | H: HUP domains (From Topology) | T: HUP domains | F: FAD_syn | ECOD (1.6) |
A | Flavokinase | e1mrzA1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Alanine racemase-C | F: Flavokinase | ECOD (1.6) |
A | FAD_syn | e1mrzA2 | A: a/b three-layered sandwiches | X: HUP domain-like | H: HUP domains (From Topology) | T: HUP domains | F: FAD_syn | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
B | 3.40.50.620 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | HUPs | CATH (4.3.0) |
B | 2.40.30.30 | Mainly Beta | Beta Barrel | Elongation Factor Tu (Ef-tu) | domain 3 | CATH (4.3.0) |
A | 3.40.50.620 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | HUPs | CATH (4.3.0) |
A | 2.40.30.30 | Mainly Beta | Beta Barrel | Elongation Factor Tu (Ef-tu) | domain 3 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF01687 | Riboflavin kinase (Flavokinase) | Riboflavin kinase | This family represents the C-terminal region of the bifunctional riboflavin biosynthesis protein known as RibC in Bacillus subtilis. The RibC protein from Bacillus subtilis has both flavokinase and flavin adenine dinucleotide synthetase (FAD-synthet ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR015865 | Riboflavin kinase domain, bacterial/eukaryotic | Domain | |
IPR023465 | Riboflavin kinase domain superfamily | Homologous Superfamily | |
IPR002606 | Riboflavin kinase, bacterial | Family | |
IPR014729 | Rossmann-like alpha/beta/alpha sandwich fold | Homologous Superfamily | |
IPR023468 | Riboflavin kinase | Family | |
IPR015864 | FAD synthetase | Domain |