1MRL
Crystal structure of streptogramin A acetyltransferase with dalfopristin
External Resource: Annotation
- Domain Annotation: SCOP/SCOPe Classification
- Domain Annotation: SCOP2 Classification
- Domain Annotation: ECOD Classification
- Domain Annotation: CATH
- AMR Gene: CARD Annotation
- AMR Gene Family: CARD Annotation
- Protein Family Annotation
- Gene Ontology: Gene Product Annotation
- InterPro: Protein Family Classification
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d1mrla_ | All beta proteins | Single-stranded left-handed beta-helix | Trimeric LpxA-like enzymes | Galactoside acetyltransferase-like | Xenobiotic acetyltransferase | (Enterococcus faecium ) [TaxId: 1352 ], | SCOPe (2.08) |
B | d1mrlb_ | All beta proteins | Single-stranded left-handed beta-helix | Trimeric LpxA-like enzymes | Galactoside acetyltransferase-like | Xenobiotic acetyltransferase | (Enterococcus faecium ) [TaxId: 1352 ], | SCOPe (2.08) |
C | d1mrlc_ | All beta proteins | Single-stranded left-handed beta-helix | Trimeric LpxA-like enzymes | Galactoside acetyltransferase-like | Xenobiotic acetyltransferase | (Enterococcus faecium ) [TaxId: 1352 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Trimeric LpxA-like enzymes | 8036503 | 3001804 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Trimeric LpxA-like enzymes | 8036503 | 3001804 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Trimeric LpxA-like enzymes | 8036503 | 3001804 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Hexapep_2_1 | e1mrlA1 | A: beta duplicates or obligate multimers | X: Single-stranded left-handed beta-helix | H: Trimeric LpxA-like enzymes (From Topology) | T: Trimeric LpxA-like enzymes | F: Hexapep_2_1 | ECOD (1.6) |
B | Hexapep_2_1 | e1mrlB1 | A: beta duplicates or obligate multimers | X: Single-stranded left-handed beta-helix | H: Trimeric LpxA-like enzymes (From Topology) | T: Trimeric LpxA-like enzymes | F: Hexapep_2_1 | ECOD (1.6) |
C | Hexapep_2_1 | e1mrlC1 | A: beta duplicates or obligate multimers | X: Single-stranded left-handed beta-helix | H: Trimeric LpxA-like enzymes (From Topology) | T: Trimeric LpxA-like enzymes | F: Hexapep_2_1 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.160.10.10 | Mainly Beta | 3 Solenoid | UDP N-Acetylglucosamine Acyltransferase | domain 1 | CATH (4.3.0) |
B | 2.160.10.10 | Mainly Beta | 3 Solenoid | UDP N-Acetylglucosamine Acyltransferase | domain 1 | CATH (4.3.0) |
C | 2.160.10.10 | Mainly Beta | 3 Solenoid | UDP N-Acetylglucosamine Acyltransferase | domain 1 | CATH (4.3.0) |
AMR Gene: CARD Annotation CARD Database Homepage
Chains | Accession | Short Name | Description | Provenance Source (Version) |
---|---|---|---|---|
ARO:3002843 | vatD | vatD is a transposon-mediated acetyltransferase found in Enterococcus faecium. | CARD (3.2.9) |
AMR Gene Family: CARD Annotation CARD Database Homepage
Chains | Accession | Gene Family | Drug Class | Resistance Machanism | Provenance Source (Version) |
---|---|---|---|---|---|
ARO:3000453 | streptogramin vat acetyltransferase | streptogramin antibiotic, streptogramin A antibiotic | antibiotic inactivation | CARD (3.2.9) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00132 | Bacterial transferase hexapeptide (six repeats) (Hexapep) | Bacterial transferase hexapeptide (six repeats) | - | Repeat |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
Streptogramin A acetyltransferase | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR011004 | Trimeric LpxA-like superfamily | Homologous Superfamily | |
IPR018357 | Hexapeptide transferase, conserved site | Conserved Site | |
IPR050179 | Transferase hexapeptide repeat | Family | |
IPR001451 | Hexapeptide repeat | Repeat |