1LVC
Crystal structure of the adenylyl cyclase domain of anthrax edema factor (EF) in complex with calmodulin and 2' deoxy, 3' anthraniloyl ATP
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
B | SCOP2B Superfamily | Nucleotidyltransferase-like | 8037911 | 3000129 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Nucleotidyltransferase-like | 8037911 | 3000129 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | PAP/OAS1 substrate-binding domain-like | 8054301 | 3000941 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Nucleotidyltransferase-like | 8037911 | 3000129 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | PAP/OAS1 substrate-binding domain-like | 8054301 | 3000941 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | EF-hand | 8033438 | 3001983 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | EF-hand | 8033438 | 3001983 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | EF-hand | 8033438 | 3001983 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | EUF08089 | e1lvcB5 | A: alpha bundles | X: Alpha-helical domain in adenylylcyclase toxin (From Topology) | H: Alpha-helical domain in adenylylcyclase toxin (From Topology) | T: Alpha-helical domain in adenylylcyclase toxin | F: EUF08089 | ECOD (1.6) |
B | Anthrax_toxA_C | e1lvcB4 | A: a+b two layers | X: Insertion domain in adenylylcyclase toxin (the edema factor) (From Topology) | H: Insertion domain in adenylylcyclase toxin (the edema factor) (From Topology) | T: Insertion domain in adenylylcyclase toxin (the edema factor) | F: Anthrax_toxA_C | ECOD (1.6) |
B | Anthrax_toxA_N | e1lvcB6 | A: a+b three layers | X: N-terminal a+b domain in adenylylcyclase toxin (From Topology) | H: N-terminal a+b domain in adenylylcyclase toxin (From Topology) | T: N-terminal a+b domain in adenylylcyclase toxin | F: Anthrax_toxA_N | ECOD (1.6) |
A | EUF08089 | e1lvcA6 | A: alpha bundles | X: Alpha-helical domain in adenylylcyclase toxin (From Topology) | H: Alpha-helical domain in adenylylcyclase toxin (From Topology) | T: Alpha-helical domain in adenylylcyclase toxin | F: EUF08089 | ECOD (1.6) |
A | Anthrax_toxA_C | e1lvcA5 | A: a+b two layers | X: Insertion domain in adenylylcyclase toxin (the edema factor) (From Topology) | H: Insertion domain in adenylylcyclase toxin (the edema factor) (From Topology) | T: Insertion domain in adenylylcyclase toxin (the edema factor) | F: Anthrax_toxA_C | ECOD (1.6) |
A | Anthrax_toxA_N | e1lvcA4 | A: a+b three layers | X: N-terminal a+b domain in adenylylcyclase toxin (From Topology) | H: N-terminal a+b domain in adenylylcyclase toxin (From Topology) | T: N-terminal a+b domain in adenylylcyclase toxin | F: Anthrax_toxA_N | ECOD (1.6) |
C | EUF08089 | e1lvcC6 | A: alpha bundles | X: Alpha-helical domain in adenylylcyclase toxin (From Topology) | H: Alpha-helical domain in adenylylcyclase toxin (From Topology) | T: Alpha-helical domain in adenylylcyclase toxin | F: EUF08089 | ECOD (1.6) |
C | Anthrax_toxA_C | e1lvcC5 | A: a+b two layers | X: Insertion domain in adenylylcyclase toxin (the edema factor) (From Topology) | H: Insertion domain in adenylylcyclase toxin (the edema factor) (From Topology) | T: Insertion domain in adenylylcyclase toxin (the edema factor) | F: Anthrax_toxA_C | ECOD (1.6) |
C | Anthrax_toxA_N | e1lvcC4 | A: a+b three layers | X: N-terminal a+b domain in adenylylcyclase toxin (From Topology) | H: N-terminal a+b domain in adenylylcyclase toxin (From Topology) | T: N-terminal a+b domain in adenylylcyclase toxin | F: Anthrax_toxA_N | ECOD (1.6) |
D | EF-hand_7_8 | e1lvcD2 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: EF-hand_7_8 | ECOD (1.6) |
D | EF-hand_7_5 | e1lvcD1 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: EF-hand_7_5 | ECOD (1.6) |
E | EF-hand_7_8 | e1lvcE2 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: EF-hand_7_8 | ECOD (1.6) |
E | EF-hand_7_5 | e1lvcE1 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: EF-hand_7_5 | ECOD (1.6) |
F | EF-hand_7_8 | e1lvcF2 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: EF-hand_7_8 | ECOD (1.6) |
F | EF-hand_7_5 | e1lvcF1 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: EF-hand_7_5 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
B | 3.90.1760.10 | Alpha Beta | Alpha-Beta Complex | Adenylylcyclase toxin fold | Anthrax toxin, edema factor, central domain | CATH (4.3.0) |
B | 1.20.140.60 | Mainly Alpha | Up-down Bundle | Butyryl-CoA Dehydrogenase, subunit A | domain 3 | CATH (4.3.0) |
A | 3.90.1760.10 | Alpha Beta | Alpha-Beta Complex | Adenylylcyclase toxin fold | Anthrax toxin, edema factor, central domain | CATH (4.3.0) |
A | 1.20.140.60 | Mainly Alpha | Up-down Bundle | Butyryl-CoA Dehydrogenase, subunit A | domain 3 | CATH (4.3.0) |
C | 3.90.1760.10 | Alpha Beta | Alpha-Beta Complex | Adenylylcyclase toxin fold | Anthrax toxin, edema factor, central domain | CATH (4.3.0) |
C | 1.20.140.60 | Mainly Alpha | Up-down Bundle | Butyryl-CoA Dehydrogenase, subunit A | domain 3 | CATH (4.3.0) |
D | 1.10.238.10 | Mainly Alpha | Orthogonal Bundle | Recoverin | domain 1 | CATH (4.3.0) |
E | 1.10.238.10 | Mainly Alpha | Orthogonal Bundle | Recoverin | domain 1 | CATH (4.3.0) |
F | 1.10.238.10 | Mainly Alpha | Orthogonal Bundle | Recoverin | domain 1 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF20850 | Oedema factor (EF), alpha-helical domain (EF_HD) | Oedema factor (EF), alpha-helical domain | This domain is found in Oedema factor (EF), the exotoxin with adenylyl cyclase activity produced by Bacillus anthracis to increase the concentration of cyclic AMP in infected host cells and disrupts intracellular signalling pathways. EF consists of f ... | Domain | |
PF03497 | Anthrax toxin LF subunit (Anthrax_toxA) | Anthrax toxin LF subunit | - | Family | |
PF13499 | EF-hand domain pair (EF-hand_7) | EF-hand domain pair | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR005165 | Anthrax toxin, edema factor, central | Domain | |
IPR024079 | Metallopeptidase, catalytic domain superfamily | Homologous Superfamily | |
IPR035099 | Anthrax toxin, edema factor, C-terminal | Homologous Superfamily | |
IPR003541 | Anthrax toxin, lethal/endema factor | Family | |
IPR014781 | Anthrax toxin, lethal/endema factor, N-/C-terminal | Domain | |
IPR037017 | Anthrax toxin, edema factor, central domain superfamily | Homologous Superfamily | |
IPR047568 | Anthrax toxin lethal factor-like domain | Domain | |
IPR049405 | Edema factor, alpha-helical domain | Domain | |
IPR002048 | EF-hand domain | Domain | |
IPR018247 | EF-Hand 1, calcium-binding site | Binding Site | |
IPR050145 | Calmodulin and Centrin Calcium-Binding Families | Family | |
IPR011992 | EF-hand domain pair | Homologous Superfamily |