1LQS
CRYSTAL STRUCTURE OF HUMAN CYTOMEGALOVIRUS IL-10 BOUND TO SOLUBLE HUMAN IL-10R1
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth R] | d1lqsr1 | All beta proteins | Immunoglobulin-like beta-sandwich | Fibronectin type III | Fibronectin type III | Interleukin-10 receptor 1, IL-10R1 | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
B [auth S] | d1lqss1 | All beta proteins | Immunoglobulin-like beta-sandwich | Fibronectin type III | Fibronectin type III | Interleukin-10 receptor 1, IL-10R1 | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
C [auth L] | d1lqsl_ | All alpha proteins | 4-helical cytokines | 4-helical cytokines | Interferons/interleukin-10 (IL-10) | Interleukin-10 (cytokine synthesis inhibitory factor, CSIF) | Human cytomegalovirus (Human betaherpesvirus 5 ) [TaxId: 10359 ], | SCOPe (2.08) |
D [auth M] | d1lqsm_ | All alpha proteins | 4-helical cytokines | 4-helical cytokines | Interferons/interleukin-10 (IL-10) | Interleukin-10 (cytokine synthesis inhibitory factor, CSIF) | Human cytomegalovirus (Human betaherpesvirus 5 ) [TaxId: 10359 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A [auth R] | SCOP2B Superfamily | Fibronectin type III | 8055147 | 3002063 | SCOP2B (2022-06-29) |
A [auth R] | SCOP2B Superfamily | Fibronectin type III | 8055535 | 3002063 | SCOP2B (2022-06-29) |
B [auth S] | SCOP2B Superfamily | Fibronectin type III | 8055535 | 3002063 | SCOP2B (2022-06-29) |
B [auth S] | SCOP2B Superfamily | Fibronectin type III | 8055147 | 3002063 | SCOP2B (2022-06-29) |
C [auth L] | SCOP2 Family | Interferons/interleukin-10 (IL-10) | 8029053 | 4000854 | SCOP2 (2022-06-29) |
C [auth L] | SCOP2 Superfamily | 4-helical cytokines | 8041432 | 3001717 | SCOP2 (2022-06-29) |
D [auth M] | SCOP2B Superfamily | 4-helical cytokines | 8041432 | 3001717 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth R] | Interfer-bind | e1lqsR2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Interfer-bind | ECOD (1.6) |
A [auth R] | Tissue_fac | e1lqsR1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Tissue_fac | ECOD (1.6) |
B [auth S] | Interfer-bind | e1lqsS2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Interfer-bind | ECOD (1.6) |
B [auth S] | Tissue_fac | e1lqsS1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Tissue_fac | ECOD (1.6) |
C [auth L] | IL10 | e1lqsL1 | A: alpha bundles | X: Ferritin/Heme oxygenase/4-helical cytokines | H: 4-helical cytokines (From Topology) | T: 4-helical cytokines | F: IL10 | ECOD (1.6) |
D [auth M] | IL10 | e1lqsM1 | A: alpha bundles | X: Ferritin/Heme oxygenase/4-helical cytokines | H: 4-helical cytokines (From Topology) | T: 4-helical cytokines | F: IL10 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A [auth R] | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
B [auth S] | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
C [auth L] | 1.20.1250.10 | Mainly Alpha | Up-down Bundle | Growth Hormone | Chain: A | CATH (4.3.0) |
C [auth L] | 4.10.340.10 | Few Secondary Structures | Irregular | Interleukin-10 | domain 2 | CATH (4.3.0) |
D [auth M] | 1.20.1250.10 | Mainly Alpha | Up-down Bundle | Growth Hormone | Chain: A | CATH (4.3.0) |
D [auth M] | 4.10.340.10 | Few Secondary Structures | Irregular | Interleukin-10 | domain 2 | CATH (4.3.0) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A [auth R], B [auth S] | IPR003961 | Fibronectin type III | Domain |
A [auth R], B [auth S] | IPR013783 | Immunoglobulin-like fold | Homologous Superfamily |
A [auth R], B [auth S] | IPR050650 | Type II Cytokine and Tissue Factor Receptors | Family |
A [auth R], B [auth S] | IPR036116 | Fibronectin type III superfamily | Homologous Superfamily |
C [auth L], D [auth M] | IPR020443 | Interleukin-10/19/20/22/24/26 family | Family |
C [auth L], D [auth M] | IPR012352 | Interleukin-10, additional helical | Homologous Superfamily |
C [auth L], D [auth M] | IPR009079 | Four-helical cytokine-like, core | Homologous Superfamily |
C [auth L], D [auth M] | IPR050594 | Interleukin-10 family cytokines | Family |
C [auth L], D [auth M] | IPR020423 | Interleukin-10, conserved site | Conserved Site |