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SINDBIS VIRUS CAPSID, (WILD-TYPE) RESIDUES 1-264, TETRAGONAL CRYSTAL FORM (FORM II) External Resource: Annotation Chains Type Family Name Domain Identifier Family Identifier Provenance Source (Version) A SCOP2 Family Viral capsid proteases-like 8071560 4002263 SCOP2 (2022-06-29) A SCOP2 Superfamily Trypsin-like serine proteases 8071561 3000114 SCOP2 (2022-06-29)
Chains Family Name Domain Identifier Architecture Possible Homology Homology Topology Family Provenance Source (Version) A Peptidase_S3 e1kxfA1 A: beta barrels X: cradle loop barrel H: RIFT-related T: FMN-binding split barrel F: Peptidase_S3 ECOD (1.6)
Chains Accession Name Description Comments Source PF00944 Alphavirus core protein (Peptidase_S3) Alphavirus core protein Also known as coat protein C and capsid protein C. This makes the literature very confusing. Alphaviruses consist of a nucleoprotein core, a lipid membrane which envelopes the core, and glycoprotein spikes protruding from the lipid membrane. Domain
Chains Polymer Molecular Function Biological Process Cellular Component SINDBIS VIRUS CAPSID PROTEIN
Chains Accession Name Type IPR002533 Alphavirus E3 spike glycoprotein Domain IPR038055 Flaviviral glycoprotein E, dimerisation domain Homologous Superfamily IPR014756 Immunoglobulin E-set Homologous Superfamily IPR042304 Alphavirus E2 glycoprotein, domain A Homologous Superfamily IPR036253 Flavivirus glycoprotein, central and dimerisation domain superfamily Homologous Superfamily IPR009003 Peptidase S1, PA clan Homologous Superfamily IPR042305 Alphavirus E2 glycoprotein, domain B Homologous Superfamily IPR042306 Alphavirus E2 glycoprotein, domain C Homologous Superfamily IPR000936 Alphavirus E2 glycoprotein Family IPR000930 Peptidase S3, togavirin Domain IPR002548 Alphavirus E1 glycoprotein Domain IPR000336 Flavivirus/Alphavirus glycoprotein, immunoglobulin-like domain superfamily Homologous Superfamily IPR043504 Peptidase S1, PA clan, chymotrypsin-like fold Homologous Superfamily