1KIL
Three-dimensional structure of the complexin/SNARE complex
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d1kila_ | Coiled coil proteins | Parallel coiled-coil | SNARE fusion complex | SNARE fusion complex | Synaptobrevin | Norway rat (Rattus norvegicus ) [TaxId: 10116 ], | SCOPe (2.08) |
B | d1kilb_ | Coiled coil proteins | Parallel coiled-coil | SNARE fusion complex | SNARE fusion complex | Syntaxin 1A | Norway rat (Rattus norvegicus ) [TaxId: 10116 ], | SCOPe (2.08) |
D | d1kild_ | Coiled coil proteins | Parallel coiled-coil | SNARE fusion complex | SNARE fusion complex | Synaptosomal-associated protein SNAP-25 | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
E | d1kile_ | Coiled coil proteins | Parallel coiled-coil | SNARE fusion complex | SNARE fusion complex | Complexin | Norway rat (Rattus norvegicus ) [TaxId: 10116 ], | SCOPe (2.08) |
C | d1kilc_ | Coiled coil proteins | Parallel coiled-coil | SNARE fusion complex | SNARE fusion complex | Synaptosomal-associated protein SNAP-25 | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | SNARE fusion complex | 8043664 | 3001549 | SCOP2B (2021-05-27) |
B | SCOP2B Superfamily | SNARE fusion complex | 8043665 | 3001549 | SCOP2B (2021-05-27) |
D | SCOP2B Superfamily | SNARE fusion complex | 8044158 | 3001549 | SCOP2B (2021-05-27) |
E | SCOP2 Family | SNARE fusion complex | 8027944 | 4003812 | SCOP2 (2021-05-27) |
E | SCOP2 Superfamily | SNARE fusion complex | 8040323 | 3001549 | SCOP2 (2021-05-27) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.20.5.110 | Mainly Alpha | Up-down Bundle | Single alpha-helices involved in coiled-coils or other helix-helix interfaces | CATH (4.3.0) | |
B | 1.20.5.110 | Mainly Alpha | Up-down Bundle | Single alpha-helices involved in coiled-coils or other helix-helix interfaces | CATH (4.3.0) | |
D | 1.20.5.110 | Mainly Alpha | Up-down Bundle | Single alpha-helices involved in coiled-coils or other helix-helix interfaces | CATH (4.3.0) | |
E | 1.20.5.580 | Mainly Alpha | Up-down Bundle | Single alpha-helices involved in coiled-coils or other helix-helix interfaces | Single Helix bin | CATH (4.3.0) |
C | 1.20.5.110 | Mainly Alpha | Up-down Bundle | Single alpha-helices involved in coiled-coils or other helix-helix interfaces | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00957 | Synaptobrevin (Synaptobrevin) | Synaptobrevin | - | Family | |
PF05739 | SNARE domain (SNARE) | SNARE domain | - | Family | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR016444 | Synaptobrevin/Vesicle-associated membrane protein | Family | |
IPR042855 | v-SNARE, coiled-coil homology domain | Domain | |
IPR001388 | Synaptobrevin-like | Family | |
IPR000727 | Target SNARE coiled-coil homology domain | Domain | |
IPR006012 | Syntaxin/epimorphin, conserved site | Conserved Site | |
IPR010989 | SNARE | Homologous Superfamily | |
IPR006011 | Syntaxin, N-terminal domain | Domain | |
IPR045242 | Syntaxin | Family | |
IPR000727 | Target SNARE coiled-coil homology domain | Domain | |
IPR039077 | SNAP25, N-terminal SNARE motif, chordates | Domain | |
IPR000928 | SNAP-25 domain | Domain | |
IPR008849 | Synaphin | Family | |
IPR000727 | Target SNARE coiled-coil homology domain | Domain | |
IPR039077 | SNAP25, N-terminal SNARE motif, chordates | Domain | |
IPR000928 | SNAP-25 domain | Domain |