1KF9
PHAGE DISPLAY DERIVED VARIANT OF HUMAN GROWTH HORMONE COMPLEXED WITH TWO COPIES OF THE EXTRACELLULAR DOMAIN OF ITS RECEPTOR
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | 4-helical cytokines | 8037071 | 3001717 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | 4-helical cytokines | 8037071 | 3001717 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Fibronectin type III | 8055511 | 3002063 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Fibronectin type III | 8055125 | 3002063 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Fibronectin type III | 8055511 | 3002063 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | Fibronectin type III | 8055511 | 3002063 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | Fibronectin type III | 8055125 | 3002063 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | Fibronectin type III | 8055125 | 3002063 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | Fibronectin type III | 8055511 | 3002063 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Hormone_1 | e1kf9A1 | A: alpha bundles | X: Ferritin/Heme oxygenase/4-helical cytokines | H: 4-helical cytokines (From Topology) | T: 4-helical cytokines | F: Hormone_1 | ECOD (1.6) |
D | Hormone_1 | e1kf9D1 | A: alpha bundles | X: Ferritin/Heme oxygenase/4-helical cytokines | H: 4-helical cytokines (From Topology) | T: 4-helical cytokines | F: Hormone_1 | ECOD (1.6) |
B | EpoR_lig-bind | e1kf9B1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: EpoR_lig-bind | ECOD (1.6) |
B | fn3_6 | e1kf9B2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: fn3_6 | ECOD (1.6) |
C | EpoR_lig-bind | e1kf9C4 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: EpoR_lig-bind | ECOD (1.6) |
C | fn3_6 | e1kf9C3 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: fn3_6 | ECOD (1.6) |
E | EpoR_lig-bind | e1kf9E1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: EpoR_lig-bind | ECOD (1.6) |
E | fn3_6 | e1kf9E2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: fn3_6 | ECOD (1.6) |
F | EpoR_lig-bind | e1kf9F1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: EpoR_lig-bind | ECOD (1.6) |
F | fn3_6 | e1kf9F2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: fn3_6 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.20.1250.10 | Mainly Alpha | Up-down Bundle | Growth Hormone | Chain: A | CATH (4.3.0) |
D | 1.20.1250.10 | Mainly Alpha | Up-down Bundle | Growth Hormone | Chain: A | CATH (4.3.0) |
B | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
C | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
E | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
F | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00103 | Somatotropin hormone family (Hormone_1) | Somatotropin hormone family | - | Domain | |
PF00041 | Fibronectin type III domain (fn3) | Fibronectin type III domain | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR001400 | Somatotropin/prolactin | Family | |
IPR018116 | Somatotropin hormone, conserved site | Conserved Site | |
IPR034975 | Somatotropin | Family | |
IPR009079 | Four-helical cytokine-like, core | Homologous Superfamily | |
IPR015152 | Growth hormone/erythropoietin receptor, ligand binding | Domain | |
IPR025871 | Growth hormone-binding protein | Domain | |
IPR013783 | Immunoglobulin-like fold | Homologous Superfamily | |
IPR003961 | Fibronectin type III | Domain | |
IPR003528 | Long hematopoietin receptor, single chain, conserved site | Conserved Site | |
IPR036116 | Fibronectin type III superfamily | Homologous Superfamily |