1JQT
Fitting of L11 protein in the low resolution cryo-EM map of E.coli 70S ribosome
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d1jqta_ | Low resolution protein structures | Ribosome and ribosomal fragments | Ribosome and ribosomal fragments | Ribosome complexes | 70S ribosome functional complex | (Escherichia coli ) [TaxId: 562 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Ribosomal_L11 | e1jqtA1 | A: alpha arrays | X: HTH | H: HTH | T: Ribosomal protein L11, C-terminal domain | F: Ribosomal_L11 | ECOD (1.6) |
A | Ribosomal_L11_N | e1jqtA2 | A: a+b two layers | X: Ribosomal protein L11/L12e N-terminal domain-like | H: Ribosomal protein L11/L12e N-terminal domain (From Topology) | T: Ribosomal protein L11/L12e N-terminal domain | F: Ribosomal_L11_N | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF03946 | Ribosomal protein L11, N-terminal domain (Ribosomal_L11_N) | Ribosomal protein L11, N-terminal domain | The N-terminal domain of Ribosomal protein L11 adopts an alpha/beta fold and is followed by the RNA binding C-terminal domain. | Domain | |
PF00298 | Ribosomal protein L11, RNA binding domain (Ribosomal_L11) | Ribosomal protein L11, RNA binding domain | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR020785 | Large ribosomal subunit protein uL11, conserved site | Conserved Site | |
IPR020783 | Large ribosomal subunit protein uL11, C-terminal | Domain | |
IPR000911 | Ribosomal protein uL11 | Family | |
IPR036769 | Large ribosomal subunit protein uL11, C-terminal domain superfamily | Homologous Superfamily | |
IPR006519 | Large ribosomal subunit protein uL11, bacterial-type | Family | |
IPR020784 | Large ribosomal subunit protein uL11, N-terminal | Domain | |
IPR036796 | Large ribosomal subunit protein uL11, N-terminal domain superfamily | Homologous Superfamily |