1JOC
EEA1 homodimer of C-terminal FYVE domain bound to inositol 1,3-diphosphate
External Resource: Annotation
- Domain Annotation: SCOP/SCOPe Classification
- Domain Annotation: SCOP2 Classification
- Domain Annotation: ECOD Classification
- Domain Annotation: CATH
- Protein Family Annotation
- Gene Ontology: Gene Product Annotation
- InterPro: Protein Family Classification
- Pharos: Disease Associations
- Membrane Protein Annotation: OPM
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d1joca1 | Small proteins | FYVE/PHD zinc finger | FYVE/PHD zinc finger | FYVE, a phosphatidylinositol-3-phosphate binding domain | Eea1 | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
A | d1joca2 | Coiled coil proteins | Parallel coiled-coil | Eea1 homodimerisation domain | Eea1 homodimerisation domain | Eea1 homodimerisation domain | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
B | d1jocb1 | Small proteins | FYVE/PHD zinc finger | FYVE/PHD zinc finger | FYVE, a phosphatidylinositol-3-phosphate binding domain | Eea1 | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
B | d1jocb2 | Coiled coil proteins | Parallel coiled-coil | Eea1 homodimerisation domain | Eea1 homodimerisation domain | Eea1 homodimerisation domain | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | FYVE, a phosphatidylinositol-3-phosphate binding domain | 8024876 | 4003768 | SCOP2 (2022-06-29) |
A | SCOP2 Family | Eea1 homodimerisation domain | 8024879 | 4003659 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | FYVE/PHD zinc finger | 8037255 | 3001459 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Eea1 homodimerisation domain | 8037258 | 3001207 | SCOP2 (2022-06-29) |
B | SCOP2B Superfamily | Eea1 homodimerisation domain | 8037258 | 3001207 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | FYVE/PHD zinc finger | 8037255 | 3001459 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | FYVE | e1jocA1 | A: few secondary structure elements | X: RING/U-box-like | H: RING/U-box-like | T: FYVE/PHD zinc finger | F: FYVE | ECOD (1.6) |
B | FYVE | e1jocB1 | A: few secondary structure elements | X: RING/U-box-like | H: RING/U-box-like | T: FYVE/PHD zinc finger | F: FYVE | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.20.5.390 | Mainly Alpha | Up-down Bundle | Single alpha-helices involved in coiled-coils or other helix-helix interfaces | L1 transposable element, trimerization domain | CATH (4.3.0) |
A | 3.30.40.10 | Alpha Beta | 2-Layer Sandwich | Herpes Virus-1 | Zinc/RING finger domain, C3HC4 (zinc finger) | CATH (4.3.0) |
B | 1.20.5.390 | Mainly Alpha | Up-down Bundle | Single alpha-helices involved in coiled-coils or other helix-helix interfaces | L1 transposable element, trimerization domain | CATH (4.3.0) |
B | 3.30.40.10 | Alpha Beta | 2-Layer Sandwich | Herpes Virus-1 | Zinc/RING finger domain, C3HC4 (zinc finger) | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF01363 | FYVE zinc finger (FYVE) | FYVE zinc finger | The FYVE zinc finger is named after four proteins that it has been found in: Fab1, YOTB/ZK632.12, Vac1, and EEA1. The FYVE finger has been shown to bind two Zn++ ions [1]. The FYVE finger has eight potential zinc coordinating cysteine positions. Man ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR013087 | Zinc finger C2H2-type | Domain | |
IPR017455 | Zinc finger, FYVE-related | Domain | |
IPR000306 | FYVE zinc finger | Domain | |
IPR011011 | Zinc finger, FYVE/PHD-type | Homologous Superfamily | |
IPR013083 | Zinc finger, RING/FYVE/PHD-type | Homologous Superfamily |
Pharos: Disease Associations Pharos Homepage Annotation
Membrane Protein Annotation: OPM OPM Database Homepage
Chains | External Link | Type | Class | Superfamily | Family |
---|---|---|---|---|---|
OPM | Monotopic/peripheral | All beta monotopic/peripheral | FYVE/PHD zinc finger | FYVE, a phosphatidylinositol-3-phosphate binding domain |