1JH3
Solution structure of tyrosyl-tRNA synthetase C-terminal domain.
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d1jh3a_ | Alpha and beta proteins (a+b) | Alpha-L RNA-binding motif | Alpha-L RNA-binding motif | Tyrosyl-tRNA synthetase (TyrRS), C-terminal domain | Tyrosyl-tRNA synthetase (TyrRS), C-terminal domain | (Geobacillus stearothermophilus ) [TaxId: 1422 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.10.290.10 | Alpha Beta | Roll | Structural Genomics Hypothetical 15.5 Kd Protein In mrcA-pckA Intergenic Region | Chain A | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF22421 | Tyrosine--tRNA ligase SYY-like C-terminal domain (SYY_C-terminal) | Tyrosine--tRNA ligase SYY-like C-terminal domain | This entry represents the C-terminal domain of Tyrosine--tRNA ligases which contains the S4 motif that binds RNA [1-5]. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR002942 | RNA-binding S4 domain | Domain | |
IPR024107 | Tyrosine-tRNA ligase, bacterial-type, type 1 | Family | |
IPR001412 | Aminoacyl-tRNA synthetase, class I, conserved site | Conserved Site | |
IPR014729 | Rossmann-like alpha/beta/alpha sandwich fold | Homologous Superfamily | |
IPR002307 | Tyrosine-tRNA ligase | Family | |
IPR002305 | Aminoacyl-tRNA synthetase, class Ic | Family | |
IPR024088 | Tyrosine-tRNA ligase, bacterial-type | Family | |
IPR036986 | RNA-binding S4 domain superfamily | Homologous Superfamily |